Bacteroidetes | Bacteroidia | Bacteroidales | Bacteroidaceae |
Genome size: 3 855 141 bp
Genomic GC% content: 41.00 %
Scanning electron microscopy (20 000x magnification)
TOP 15 in enzymes expressed during growth in BHI medium as determined by protein mass spectrometry
Enzyme | PSM counts | Pathway |
Phosphoglucomutase (EC 5.4.2.2) | 313 | Glycolysis/Gluconeogenesis |
Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90) | 273 | Glycolysis/Gluconeogenesis |
Fructose-bisphosphate aldolase (EC 4.1.2.13) | 366 | Glycolysis/Gluconeogenesis |
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) | 3068 | Glycolysis/Gluconeogenesis |
Phosphoglycerate kinase (EC 2.7.2.3) | 547 | Glycolysis/Gluconeogenesis |
Enolase (EC 4.2.1.11) | 467 | Glycolysis/Gluconeogenesis |
Phosphoenolpyruvate carboxykinase (EC 4.1.1.49) | 631 | Glycolysis/Gluconeogenesis |
Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.1) | 455 | Glycolysis/Gluconeogenesis |
Pyruvate formate-lyase (EC 2.3.1.54) | 262 | Pyruvate metabolism |
Succinate dehydrogenase (EC 1.3.5.1) | 234 | Citrate cycle (TCA cycle) |
Fumarate hydratase (EC 4.2.1.2) | 342 | Citrate cycle (TCA cycle) |
Cysteine synthase (EC 2.5.1.47) | 444 | Cysteine and methionine metabolism |
O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) | 259 | Cysteine and methionine metabolism |
Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16) | 632 | Lysine biosynthesis |
ATP synthase (EC 7.1.2.2) | 318 | Oxidative phosphorylation |
MS raw data: An767
culture medium: Wilkins-Chalgren Anaerobe Agar
16S rRNA sequence:
GAAGAGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATGCAAGTCGAGGGGCAGCATGAACTTAGCTTGCTAAGTTTGATGGCGACCGGCGCACGGGTGAGTAACACGTATCCAACCTTCCGTTTACTCAGGGATAGCCTTTCGAAAGAAAGATTAATACCTGATAGTATGGTGAGATTGCATGATAGCACCATTAAAGATTTATTGGTAAACGATGGGGATGCGTTCCATTAGGTAGTAGGCGGGGTAACGGCCCACCTAGCCGACGATGGATAGGGGTTCTGAGAGGAAGGTCCCCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAACCAGCCAAGTAGCGTGAAGGATGAAGGTCCTACGGATTGTAAACTTCTTTTATACGGGAATAAAGTATCCTACGTGTAGGATTTTGTATGTACCGTATGAATAAGCATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGCAGACGGGAGATTAAGTCAGTTGTGAAAGTTTGCGGCTCAACCGTAAAATTGCAGTTGATACTGGTTTCCTTGAGTGCAGTTGAGGCAGGCGGAATTCGTGGTGTAGCGGTGAAATGCTTAGATATCACGAAGAACCCCGATTGCGAAGGCAGCTTGCTAAACTGTAACTGACGTTCATGCTCGAAAGTGTGGGTATCAAACAGGATTAGATACCCTGGTAGTCCACACGGTAAACGATGGATACTCGCTGTTGGCGATATACTGTCAGCGGCCAAGCGAAAGCATTAAGTATCCCACCTGGGGAGTACGCCGGCAACGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGAGGAACATGTGGTTTAATTCGATGATACGCGAGGAACCTTACCCGGGCTTAAATTGCAGACGAATTACCTGGAAACAGGTAAGCCGCAAGGCGTCTGTGAAGGTGCTGCATGGTTGTCGTCAGCTCGTGCCGTGAGGTGTCGGCTTAAGTGCCATAACGAGCGCAACCCTCGTGGTCAGTTACTAACAGGTAACGCTGAGGACTCTGGCCAGACTGCCATCGTAAGATGTGAGGAAGGTGGGGATGACGTCAAATCAGCACGGCCCTTACGTCCGGGGCTACACACGTGTTACAATGGGAGGTACAGAAGGCCGCTACCCGGCGACGGGATGCCAATCCCCAAAACCTCTCTCAGTTCGGACTGGAGTCTGCAACCCGACTCCACGAAGCTGGATTCGCTAGTAATCGCGCATCAGCCACGGCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCAAGCCATGAAAGCCGGGGGTACCTGAAGTGCGTAACCGCAAGGAGCGCCCTAGGGTAAAACCGGTAATTGGGGCTAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAACACCTCCTTT