Bacteroidetes | Bacteroidia | Bacteroidales | Bacteroidaceae |
Genome size: 4 182 994 bp
Genomic GC% content: 46.00 %
Scanning electron microscopy (20 000x magnification)
TOP 15 in enzymes expressed during growth in BHI medium as determined by protein mass spectrometry
Enzyme | PSM counts | Pathway |
Malate dehydrogenase (EC=1.1.1.37) | 250 | Citrate cycle (TCA cycle) |
Alpha-galactosidase AgaA (EC=3.2.1.22) | 126 | Galactose metabolism |
Pyrophosphate–fructose 6-phosphate 1-phosphotransferase (EC=2.7.1.90) | 168 | Glycolysis / Gluconeogenesis |
Fructose-bisphosphate aldolase (EC=4.2.1.13) | 203 | Glycolysis / Gluconeogenesis |
Glyceraldehyde-3-phosphate dehydrogenase A (EC=1.2.1.12) | 276 | Glycolysis / Gluconeogenesis |
Phosphoenolpyruvate carboxykinase (ATP) (EC=4.1.1.49) | 993 | Glycolysis / Gluconeogenesis |
Phosphoribosylformylglycinamidine synthase (EC=6.3.5.3) | 340 | Purine metabolism |
Pyruvate kinase (EC=2.7.1.40) | 130 | Pyruvate metabolism |
Pyruvate:ferredoxin oxidoreductase (EC=1.2.7.1) | 298 | Pyruvate metabolism |
Formate acetyltransferase (EC=2.3.1.54) | 153 | Pyruvate metabolism |
Glycogen phosphorylase (EC=2.4.1.1) | 227 | Starch and sucrose metabolism |
Levanase (EC=3.2.1.80) | 201 | Starch and sucrose metabolism |
Fumarate reductase flavoprotein subunit (EC=1.3.5.4) | 271 | |
Transketolase (EC=2.2.1.1) | 120 | |
Phosphoglucomutase (EC=5.4.2.2) | 112 |
MS raw data: An558
culture medium: Yeast Casitone Fatty Acids Agar
16S rRNA sequence:
ATGAAGAGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCCTAACACATGCAAGTCGAGGGGCAGCATGGGCTTAGCTTGCTAAGCCTGATGGCGACCGGCGCACGGGTGAGTAACGCGTATCCGACCTTCCGGCGGCCCGGGTCCAGCCTTTCGAAAGAAAGATTAATCCCCGATGGTGTCAGGCAGTTCCATGACAGCCTGACTAAAGAATTATCGGCCGCCGATGGGGATGCGTTCCATTAGCTTGTTGGCGGGGTAACGGCCCACCAAGGCGACGATGGATAGGGGTTCTGAGAGGAAGGCCCCCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGCGAGCCTGAACCAGCCAAGTAGCGTGGAGGATGACTGCCCTACGGGTTGTAAACTCCTTTTGCAGGGGGATAAAGTGTGCCACGCGTGGCATATTGCAGGTACCCTGCGAATAAGCATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGCAGACGGCCCCTTAAGTCAGCTGTGAAAGTTTGCGGCTCAACCGTAAAATTGCAGTTGAAACTGTGGGGCTTGAGTACGGTCGCGGCATGCGGAATTCGTGGTGTAGCGGTGAAATGCATAGATATCACGAAGAACCCCGATTGCGAAGGCAGCATGCCAGCCCGCCACTGACGTTGAGGCTCGAAGGTGCGGGTATCAAACAGGATTAGATACCCTGGTAGTCCGCACGGTAAACGATGGACACCCGCTGTCGGCGATATACAGTCGGCGGCCAAGCGAAAGCGTTAAGTGTCCCACCTGGGGAGTACGCCGGCAACGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGAGGAACATGTGGTTTAATTCGATGATACGCGAGGAACCTTACCCGGGCTTGAACTGCGCCTGAATGTGCCGGAAACGGTACAGCCGCAAGGCAGGCGCGGAGGTGCTGCATGGTTGTCGTCAGCTCGTGCCGTGAGGTGTCGGCTTAAGTGCCATAACGAGCGCAACCCCTTCCGGCAGTTGCCATCAGGTGATGCTGGGTACTCTGCCGGTACTGCCATCGTAAGATGCGAGGAAGGTGGGGATGACGTCAAATCAGCACGGCCCTTACGTCCGGGGCTACACACGTGTTACAATGGGGGGTACAGAGGGCAGCCAGCCGGCGACGGCGCGCGAATCCCGAAATCCCCTCCCAGTTCGGACTGGAGCCTGCAACCCGGCTCCACGAAGCTGGATTCGCTAGTAATCGCGCATCAGCCATGGCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCAAGCCATGAAAGCCGGGGGTACCTGAAGTGCGTAACCGCAAGGGGCGCCCTAGGGTAAAACCGGTGATTGGGGCTAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAACACCTCCTTT