Bacteroides salanitronis An322

Bacteroidetes  Bacteroidia Bacteroidales Bacteroidaceae

Genome size: 3 449 415 bp

Genomic GC% content: 44.84 %

Scanning electron microscopy (20 000x magnification)

 

TOP 15 in enzymes expressed during growth in BHI medium as determined by protein mass spectrometry

Enzyme PSM counts Pathway
Fumarate hydratase class I, anaerobic (EC=4.2.1.2) 215 Citrate cycle (TCA cycle)
Malate dehydrogenase (EC=1.1.1.37) 205 Citrate cycle (TCA cycle)
Phosphoglucomutase (EC=5.4.2.2) 211 Glycolysis / Gluconeogenesis
Pyrophosphate–fructose 6-phosphate 1-phosphotransferase (EC=2.7.1.90) 261 Glycolysis / Gluconeogenesis
Glyceraldehyde-3-phosphate dehydrogenase A (EC=1.2.1.12) 1940 Glycolysis / Gluconeogenesis
Transketolase(EC=2.2.1.1) 241 Pentose phosphate pathway
Phosphoenolpyruvate carboxykinase (ATP) (EC=4.1.1.49) 2524 Pyruvate metabolism
Pyruvate, phosphate dikinase (EC=2.7.9.1) 208 Pyruvate metabolism
Pyruvate:ferredoxin oxidoreductase (EC=1.2.7.1) 325 Pyruvate metabolism
NADP-dependent malic enzyme (EC=1.1.1.40) 188 Pyruvate metabolism
Formate acetyltransferase (EC=2.3.1.54) 184 Pyruvate metabolism
Xylose isomerase (EC=5.3.1.5) 426 Starch and sucrose metabolism
Glycogen phosphorylase (EC=2.4.1.1) 241 Starch and sucrose metabolism
Fumarate reductase flavoprotein subunit (EC=1.3.5.4) 771
1,3-propanediol dehydrogenase (EC=1.1.1.202) 209

MS raw data: An322

16S rRNA sequence:

GATGGGTAGGGGTTCTGAGAGGAAGGCCCCCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGCTGAACCAGCCAAGTAGCGTGGAGGATGACTGCCCTACGGGTTGTAAACTCCTTTTATAAGGGGGTAAAGGCGTCTACGTGTAGATGTTTGCAAGTACCTTATGAATAAGCATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGACGGGATGTCAAGTCAGCTGTGAAAGTCTGCGGCTTAACCGTAGAACTGCAGTTGAAACTGGCGTTCTTGAGTGCGTTCGAGGCAGGCGGAATTCGTGGTGTAGCGGTGAAATGCATAGATATCACGAAGAACCCCGATTGCGAAGGCAGCCTGCCAGGCCGCTACTGACGTTGAAGCTCGAAAGTGCGGGTATCAAACAGGATTAGATACCCTGGTAGTCCGCACGGTAAACGATGGGCACTCGCTGTCGGCGACATACGGCCGGCGGCTTAGCGAAAGCGTTAAGTGCCCCACCTGGGGAGTACGCCGGCAACGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGAGGAACATGTGGTTTAATTCGATGATACGCGAGGAACCTTACCCGGGCTTGAACTGTGCCTGAATCCAGAGGAAACTCCGGAGCCAGCAATGGCAGGCATGGAGGTGCTGCATGGTTGTCGTCAGCTCGTGCCGTGAGGTGTCGGCTTAAGTGCCATAACGAGCGCAACCCCTTCGGCCAGTTGCCATCAGGTGGTGCTGGGGACTCTGGCCGTACTGCCATCGTAAGATGCGAGGAAGGTGGGGATGACGTCAAATCAGCACGGCCCTTACGTCCGGGGCTACACACGTGTTACAATGGGGGGTACAGAGGGCCGCCATCCGGCGACGGAGCGCCAATCCCGAAAGCCTCCCCCAGTTCGGACTGGAGTCTGCAACCCGACTCCACGAAGCTGGATTCGCTAGTAATCGCGCATCAGCCACGGCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCAAGCCATGAAAGCCGGGGGTACCTGAAGTGCGTAACCGTAAGGGGCGCCCTAGGGTAAAACCGGTGATTGGGGCTAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAACACCTCCTTT