Barnesiella viscericola ET7

Bacteroidetes Bacteroidia Bacteroidales Porphyromonadaceae

Genome size: 3 388 394 bp

Genomic GC% content: 52.70 %

Scanning electron microscopy (20 000x magnification)

TOP 15 in enzymes expressed during growth in BHI medium as determined by protein mass spectrometry

Enzyme PSM counts Pathway
Pyrophosphate–fructose 6-phosphate 1-phosphotransferase (EC 2.7.1.90) 367 Glycolysis
Fructose-bisphosphate aldolase (EC 4.1.2.13) 208 Glycolysis
Glyceraldehyde-3-phosphate dehydrogenase A (EC 1.2.1.12) 4163 Glycolysis
Pyruvate:ferredoxin oxidoreductase (EC 1.2.7.1) 404 Glycolysis
Pyruvate, phosphate dikinase (EC 2.7.9.1) 359 Glycolysis
Phosphoenolpyruvate carboxykinase (ATP) (EC 4.1.1.49) 845 Glycolysis
Inosine-5′-monophosphate dehydrogenase (EC 1.1.1.205) 408 Purine metabolism
Glycogen phosphorylase (EC 2.4.1.1) 286 Starch and sucrose metabolism
Malate dehydrogenase (EC 1.1.1.37) 976 TCA
Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) 566 succinate-propionate conversion
Methylmalonyl-CoA mutase large subunit (EC 5.4.99.2) 272 succinate-propionate conversion
Methylmalonyl-CoA mutase small subunit (EC 5.4.99.2) 334 succinate-propionate conversion
Glucosamine-6-phosphate deaminase (EC 3.5.99.6) 542
Caffeyl-CoA reductase-Etf complex subunit CarE (EC 1.3.1.108) 355
Enoyl-[acyl-carrier-protein] reductase [NADH] FabI (EC 1.3.1.9) 287

 

16S rRNA sequence:

CGAAGAGTTTGATCCTGGCTCAGGATGAACGCTAGCGACAGGCCTAACACATGCAAGTCGAGGGGCAGCGCGGAGGTAGCAATACATCTGGCGGCGACCGGCGCACGGGTGAGTAACACGTATGCAATCTGCCTGTAACAGGGGGATAACCCGGAGAAATCCGGCCTAATACCCCATAACGACGAGATCTCGCATGGGGATTCGTCTAAAGAGAGCAATCTTGGTTACAGATGAGCATGCGGTCCATTAGCCAGTTGGCGGGGTAACGGCCCACCAAAGCGACGATGGATAGGGGTTCTGAGAGGAAGGTCCCCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGTCGGCAGACTGAACCAGCCAAGTCGCGTGAAGGAAGACGGCCCTAAGGGTTGTAAACTTCTTTTGTCGGAGAGTAAAGGTCTTCACGAGTGGAGATTTGCAAGTATCCGAAGAAAAAGCATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGCATGACAAGTCAGCGGTGAAATGCCCGGGCTTAACCCGGGAGCTGCCGTTGAAACTGTCGAGCTAGCGTGCACAAGAGGTAGGCGGAATGCGTGGTGTAGCGGTGAAATGCATAGATATCACGCAGAACCCCGATTGCGAAGGCAGCCTACTAGGGTGCAACGGACGCTGAAGCACGAAAGCGTGGGTATCGAACAGGATTAGATACCCTGGTAGTCCACGCAGTAAACGATGAATACTAACTGTTTGCGATATAATGTAAGTGGTACAGCGAAAGCGTTAAGTATTCCACCTGGGGAGTACGCCGGCAACGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGAGGAACATGTGGTTTAATTCGATGATACGCGAGGAACCTTACCCGGGCTCAAACGCAGGGGGAATATGGGTGAAAGCCCATAGTCGGTAACGGCCGCCTGCGAGGTGCTGCATGGTTGTCGTCAGCTCGTGCCGTGAGGTGTCGGCTTAAGTGCCATAACGAGCGCAACCCCTATTGACAGTTACTAACGGGTCAGGCCGAGGACTCTGTCGAGACTGCCGGCGCAAGCCGCGAGGAAGGTGGGGATGACGTCAAATCAGCACGGCCCTTACGTCCGGGGCGACACACGTGTTACAATGGCAGGTACAGAAGGCAGCCAACCAGCAATGGTGAGCGAATCCCAAAAACCTGTCTCAGTTCGGATTGGAGTCTGCAACTCGACTCCATGAAGCTGGATTCGCTAGTAATCGCGCATCAGCCATGGCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCAAGCCATGGAAGCCGGGAGTACCTGAAGCATGCAACCGCAAGGAGCGTACGAAGGTAATACCGGTAACTGGGGCTAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAACACCTCCTTT