Firmicutes | Negativicutes | Selenomonadales | Veillonellaceae |
Genome size: 2 341 844 bp
Genomic GC% content: 44.50 %
Scanning electron microscopy (20 000x magnification)
TOP 15 in enzymes expressed during growth in BHI medium as determined by protein mass spectrometry
Enzyme | PSM counts | Pathway |
Malate dehydrogenase (EC 1.1.1.37) | 2419 | Citrate cycle (TCA cycle) |
Sirohydrochlorin cobaltochelatase CbiK (EC 4.99.1.3) | 2138 | Porphyrin metabolism |
Succinate dehydrogenase (EC 1.3.99.1) | 1579 | Citrate cycle (TCA cycle) |
Methylmalonyl-CoA mutase (EC 5.4.99.2) | 783 | |
L-lactate dehydrogenase | 664 | Glycolysis |
Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) | 606 | |
Glutamate formiminotransferase (EC 2.1.2.5) | 524 | Amino acid metabolism |
Ornithine carbamoyltransferase (EC 2.1.3.3) | 446 | Arginine biosynthesis |
ATP:Cob(I)alamin adenosyltransferase (EC 2.5.1.17) | 435 | Porphyrin metabolism |
Pyruvate carboxylase (EC 6.4.1.1) | 398 | Pyruvate metabolism |
Acetyl-CoA hydrolase (EC 3.1.2.1 ) | 383 | Pyruvate metabolism |
Acetyl-coenzyme A carboxyl transferase (EC 6.4.1.2); Propionyl-CoA carboxylase (EC 6.4.1.3) | 381 | Pyruvate metabolism |
Glutamine synthetase, clostridia type (EC 6.3.1.2) | 370 | Arginine biosynthesis |
2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) | 333 | Citrate cycle (TCA cycle) |
Fumarate hydratase (EC 4.2.1.2) | 326 | Citrate cycle (TCA cycle) |
MS raw data:An354
culture medium: Wilkins-Chalgren Anaerobe Agar
16S rRNA sequence:
AGCTATCGCTGAAGGAGGGGATTGCGTCTGATTAGCTAGTTGGAGGGGTAACGGCCCACCAAGGCGATGATCAGTAGCCGGTCTGAGAGGATGAACGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTGGGGAATCTTCCGCAATGGACGAAAGTCTGACGGAGCAACGCCGCGTGAGTGATGACGGCCTTCGGGTTGTAAAGCTCTGTTAATCGGGACGAAAGAGCCTTGTGTGAATAATGCGAGGAAGTGACGGTACCGGAATAGAAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCAGGCGGATGCGTAAGTCTATCTTAAAAGTGCGGGGCTTAACCCCGTGAGGGGATGGAAACTGGGCATCTAGAGTATCGGAGAGGAAAGCGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAAGAACACCAGTGGCGAAGGCGGCTTTCTGGACGACAACTGACGCTGAGGCGCGAAAGCCAGGGGAGCGAACGGGATTAGATACCCCGGTAGTCCTGGCCGTAAACGATGGGTACTAGGTGTAGGAGGTATCGACCCCTTCTGTGCCGGAGTTAACGCAATAAGTACCCCGCCTGGGGAGTACGATCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGTATGTGGTTTAATTCGACGCAACGCGAAGAACCTTACCAGGTCTTGACATTGATGGACGAAACAAGAGATTGTTTTTCTCCTTCGGGAGCCAGAAAACAGGTGGTGCACGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTATCTTATGTTGCCAGCACTTCGGGTGGGGACTCATGAGAGACTGCCGCAGACAATGCGGAGGAAGGCGGGGATGACGTCAAGTCATCATGCCCCTTATGACCTGGGCTACACACGTACTACAATGGGCTTTAATAGAGGGAAGCAAAGCGGCGACGCGGAGCAAACCCCAGAAACAAGCTCTCAGTTCGGATCGTAGGCTGCAACTCGCCTACGTGAAGTCGGAATCGCTAGTAATCGCAGGTCAGCATACTGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACGAAAGTCGGAAGTACCCAAAGTCGGTGGGGTAACCTTCGGGAGCCAGCCGCCTAAGGTAAAGTCGATGATTGGGGTGAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATCACCTCCTTT