Bifidobacterium saeculare An816

Actinobacteria Actinobacteria Bifidobacteriales Bifidobacteriaceae

Velikost genomu: 2 068 307 bp

Obsah GC% v genomu: 64,00 %

Skenovací elektronová mikroskopie (zvětšení 20 000x)

TOP 15 enzymů exprimovaných během růstu v BHI mediu stanovené proteinovou hmotnostní spektrometrií

Enzyme PSM counts Pathway
Phosphoglucomutase (EC 5.4.2.2) 144 Glycolysis
Glucose-6-phosphate isomerase (EC 5.3.1.9) 107 Glycolysis
Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 166 Glycolysis
Phosphoglycerate kinase (EC 2.7.2.3) 116 Glycolysis
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (EC 5.4.2.11) 81 Glycolysis
Enolase (EC 4.2.1.11) 128 Glycolysis
Pyruvate kinase (EC 2.7.1.40) 119 Glycolysis
Xylulose-5-phosphate/fructose-6-phosphate phosphoketolase (EC 4.1.2.22) 372 Pentose phosphate pathway
Transaldolase (EC 2.2.1.2) 180 Pentose phosphate pathway
Transketolase (EC 2.2.1.1) 134 Pentose phosphate pathway
Formate acetyltransferase 1 (EC 2.3.1.54) 280
Maltodextrin phosphorylase (EC 2.4.1.1) 130
Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) 128
Formate–tetrahydrofolate ligase (EC 6.3.4.3) 102
Inosine-5′-monophosphate dehydrogenase (EC 1.1.1.205) 101

 

MS raw data:An816

Sekvence 16S rRNA:
TTCGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATGCAAGTCGAACGGGATCCCTGGCGCTTGCGCCGGGGTGAGAGTGGCGAACGGGTGAGTAATGCGTGACCAACCTGCCCCATGCACCGGAATAGCTCCTGGAAACGGGTGGTAATGCCGGATGCTCCAGATGACCGCATGGGATTCTGGGAAAGCTTTTGCGGCATGGGATGGGGTCGCGTCCTATCAGCTTGTTGGTGGGGTGATGGCCCACCAAGGCTTCGACGGGTAGCCGGCCTGAGAGGGCGACCGGCCACATTGGGACTGAGATACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGCGAAAGCCTGACGCAGCGACGCCGCGTGCGGGATGGAGGCCTTCGGGTTGTAAACCGCTTTTATCGGGGAGCAAGCGAGAGTGAGTGTACCCGTTGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTATCCGGATTTATTGGGCGTAAAGGGCTCGTAGGCGGTTCGTCGCGTCTGGTGTGAAAGTCCATCGCTTAACGGTGGATCTGCGCCGGGTACGGGCGGGCTGGAGTGCGGCAGGGGAGACTGGAATTCCCGGTGTAACGGTGGAATGTGTAGATATCGGGAAGAACACCAATGGCGAAGGCAGGTCTCTGGGCCGTTACTGACGCTGAGGAGCGAAAGCGTGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGGTGGATGCTGGATGTGGGGCCCTTTCCACGGGTTCCGTGTCGGAGCTAACGCGTTAAGCATCCCGCCTGGGGAGTACGGCCGCAAGGCTAAAACTCAAAGAAATTGACGGGGGCCCGCACAAGCGGCGGAGCATGCGGATTAATTCGATGCAACGCGAAGAACCTTACCTGGGCTTGACATGTTCCCGACGACCTCAGAGATGGGGTTTCCCTTCGGGGCGGGTTCACAGGTGGTGCATGGTCGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGCCCCGTGTTGCCAGCGCGTCATGGCGGGAACTCACGGGGGACCGCCGGGGTTAACCCGGAGGAAGGCGGGGATGACGTCAGATCATCATGCCCCTTACGTCCAGGGCTTCACGCATGCTACAATGGCCGGTACAACGGGATGCGACATGGCGACATGGAGCGGATCCCTGAAAACCGGTCTCAGTTCGGATCGCAGTCTGCAACTCGACTGCGTGAAGGCGGAGTCGCTAGTAATCGCGAATCAGCAACGTCGCGGTGAATGCGTTCCCGGGCCTTGTACACACCGCCCGTCAAGTCATGAAAGGGGGCAGCACCCGAAGCCGGTGGCCTAACCCTTGTGGGGGGGAGCCGTCTAAGGTGAGGCTCGTGATTGGGACTAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATCACCTCCTTT