Actinobacteria | Actinobacteria | Bifidobacteriales | Bifidobacteriaceae |
Velikost genomu: 2 068 307 bp
Obsah GC% v genomu: 64,00 %
Skenovací elektronová mikroskopie (zvětšení 20 000x)
TOP 15 enzymů exprimovaných během růstu v BHI mediu stanovené proteinovou hmotnostní spektrometrií
Enzyme | PSM counts | Pathway |
Phosphoglucomutase (EC 5.4.2.2) | 144 | Glycolysis |
Glucose-6-phosphate isomerase (EC 5.3.1.9) | 107 | Glycolysis |
Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) | 166 | Glycolysis |
Phosphoglycerate kinase (EC 2.7.2.3) | 116 | Glycolysis |
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (EC 5.4.2.11) | 81 | Glycolysis |
Enolase (EC 4.2.1.11) | 128 | Glycolysis |
Pyruvate kinase (EC 2.7.1.40) | 119 | Glycolysis |
Xylulose-5-phosphate/fructose-6-phosphate phosphoketolase (EC 4.1.2.22) | 372 | Pentose phosphate pathway |
Transaldolase (EC 2.2.1.2) | 180 | Pentose phosphate pathway |
Transketolase (EC 2.2.1.1) | 134 | Pentose phosphate pathway |
Formate acetyltransferase 1 (EC 2.3.1.54) | 280 | |
Maltodextrin phosphorylase (EC 2.4.1.1) | 130 | |
Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) | 128 | |
Formate–tetrahydrofolate ligase (EC 6.3.4.3) | 102 | |
Inosine-5′-monophosphate dehydrogenase (EC 1.1.1.205) | 101 |
MS raw data:An816
Sekvence 16S rRNA:
TTCGATTCTGGCTCAGGATGAACGCTGGCGGCGTGCTTAACACATGCAAGTCGAACGGGATCCCTGGCGCTTGCGCCGGGGTGAGAGTGGCGAACGGGTGAGTAATGCGTGACCAACCTGCCCCATGCACCGGAATAGCTCCTGGAAACGGGTGGTAATGCCGGATGCTCCAGATGACCGCATGGGATTCTGGGAAAGCTTTTGCGGCATGGGATGGGGTCGCGTCCTATCAGCTTGTTGGTGGGGTGATGGCCCACCAAGGCTTCGACGGGTAGCCGGCCTGAGAGGGCGACCGGCCACATTGGGACTGAGATACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGCGAAAGCCTGACGCAGCGACGCCGCGTGCGGGATGGAGGCCTTCGGGTTGTAAACCGCTTTTATCGGGGAGCAAGCGAGAGTGAGTGTACCCGTTGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTATCCGGATTTATTGGGCGTAAAGGGCTCGTAGGCGGTTCGTCGCGTCTGGTGTGAAAGTCCATCGCTTAACGGTGGATCTGCGCCGGGTACGGGCGGGCTGGAGTGCGGCAGGGGAGACTGGAATTCCCGGTGTAACGGTGGAATGTGTAGATATCGGGAAGAACACCAATGGCGAAGGCAGGTCTCTGGGCCGTTACTGACGCTGAGGAGCGAAAGCGTGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGGTGGATGCTGGATGTGGGGCCCTTTCCACGGGTTCCGTGTCGGAGCTAACGCGTTAAGCATCCCGCCTGGGGAGTACGGCCGCAAGGCTAAAACTCAAAGAAATTGACGGGGGCCCGCACAAGCGGCGGAGCATGCGGATTAATTCGATGCAACGCGAAGAACCTTACCTGGGCTTGACATGTTCCCGACGACCTCAGAGATGGGGTTTCCCTTCGGGGCGGGTTCACAGGTGGTGCATGGTCGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTCGCCCCGTGTTGCCAGCGCGTCATGGCGGGAACTCACGGGGGACCGCCGGGGTTAACCCGGAGGAAGGCGGGGATGACGTCAGATCATCATGCCCCTTACGTCCAGGGCTTCACGCATGCTACAATGGCCGGTACAACGGGATGCGACATGGCGACATGGAGCGGATCCCTGAAAACCGGTCTCAGTTCGGATCGCAGTCTGCAACTCGACTGCGTGAAGGCGGAGTCGCTAGTAATCGCGAATCAGCAACGTCGCGGTGAATGCGTTCCCGGGCCTTGTACACACCGCCCGTCAAGTCATGAAAGGGGGCAGCACCCGAAGCCGGTGGCCTAACCCTTGTGGGGGGGAGCCGTCTAAGGTGAGGCTCGTGATTGGGACTAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATCACCTCCTTT