Bacteroidetes | Bacteroidia | Bacteroidales | Bacteroidaceae |
Velikost genomu: 3 437 559 bp
Obsah GC% v genomu: 45,10 %
Skenovací elektronová mikroskopie (zvětšení 20 000x)
TOP 15 enzymů exprimovaných během růstu v BHI mediu stanovené proteinovou hmotnostní spektrometrií
Enzyme | PSM counts | Pathway |
Fumarate hydratase class I (EC=4.2.1.2) | 111 | Citrate cycle (TCA cycle) |
Glyceraldehyde-3-phosphate dehydrogenase(EC=1.2.1.12) | 2271 | Glycolysis |
Phosphoenolpyruvate carboxykinase (ATP) (EC=4.1.1.49) | 717 | Glycolysis |
Pyruvate:ferredoxin oxidoreductase (EC=1.2.7.1) | 490 | Glycolysis |
Enolase (EC=4.2.1.11) | 194 | Glycolysis |
Phosphoglucomutase (EC=5.4.2.2) | 175 | Glycolysis |
Fructose-bisphosphate aldolase (EC=4.1.2.13) | 114 | Glycolysis |
Pyruvate kinase (EC=2.7.1.40) | 112 | Glycolysis |
Meso-diaminopimelate D-dehydrogenase (EC=1.4.1.16) | 110 | Lysine biosynthesis |
Adenylosuccinate synthetase (EC=6.3.4.4) | 123 | Purine metabolism |
Polyribonucleotide nucleotidyltransferase (EC=2.7.7.8) | 200 | |
Biotin carboxylase (EC=6.3.4.14) | 153 | |
Fumarate reductase flavoprotein subunit (EC=1.3.5.4) | 173 | Anaerobní respirace |
O-acetyl-L-homoserine sulfhydrylase (EC=2.5.1.-) | 101 | |
Polyribonucleotide nucleotidyltransferase (EC=2.7.7.8) | 102 |
MS raw data: ET2
Sekvence 16S rRNA:
ATGAAGAGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATGCAAGTCGAGGGGCAGCATGTATCTGGCTTGCCAGATACGATGGCGACCGGCGCACGGGTGAGTAACGCGTATCCAACCTGCCCCGTACACGGGGATAGCCTTCCGAAAGGGAGATTAATACCCGATGATGTCAGGAGTTCGCATGTAAACCTGACTAAAGTTATTACGGTACGGGAGGGGGGTGCGTTCCATTAGGTAGTAGGCGGGGTAACGGCCCACCTAGCCGACGATGGATAGGGGTTCTGAGAGGAAGGTCCCCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGGGAGGCTGAACCAGCCAAGTAGCGTGAAGGATGACGGCCCTACGGGTTGTAAACTTCTTTTATGCGGGATTAACGTGAGGTACGTGTACCTTATTGCAGGTACCGCATGAATAAGCATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGCAGACGGCATGTCAAGTCAGCTGTGAAAGTTCGGGGCTCAACCTTGGAATTGCAGTTGAAACTGGCGTGCTTGAGTTCGGTCGAGGCAGGCGGAATTCGTGGTGTAGCGGTGAAATGCTTAGATATCACGAAGAACCCCGATTGCGAAGGCAGCTTGCCAGGCCTGGACTGACGTTGAGGCTCGAAGGTGCGGGTATCGAACAGGATTAGATACCCTGGTAGTCCGCACGGTAAACGATGGATACTCGCTGTCGGCGATACACGGTCGGCGGCCAAGCGAAAGCGTTAAGTATCCCACCTGGGGAGTACGCCGGCAACGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGAGGAACATGTGGTTTAATTCGATGATACGCGAGGAACCTTACCCGGGCTTGAACTGTGCCTGACTGCCTCAGAGATGGGGCTTCCAGCAATGGCAGGCATGGAGGTGCTGCATGGTTGTCGTCAGCTCGTGCCGTGAGGTGTCGGCTTAAGTGCCATAACGAGCGCAACCCCTCCCGCCAGTTGCCATCAGGTAAAGCTGGGCACTCTGGGGGCACTGCCACCGCAAGGTGTGAGGAAGGTGGGGATGACGTCAAATCAGCACGGCCCTTACGTCCGGGGCTACACACGTGTTACAATGGGAGGTCACAGAGGGCTGCTACCCGGCGACGGGACGCCAATCCCCAAACCCTCCCTCAGTACGGACTGGAGTCTGCAACCCGACTCCACGAAGCTGGATTCGCTAGTAATCGCGCATCAGCCACGGCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCAAGCCATGAAAGCCGGCGGTGCCTGAAGTGCGTAACCGCAAGGGGCGCCCTAGGGTAAAGCCGGTGATTGGGGCTAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAACACCTCCTTT