Butyricicoccus pullicaecorum An179

Firmicutes Clostridia Clostridiales Ruminococcaceae

Velikost genomu: 3 474 625 bp

Obsah GC% v genomu: 53,61 %

Skenovací elektronová mikroskopie (zvětšení 11 000x)

 

TOP 15 enzymů exprimovaných během růstu v BHI mediu stanovené proteinovou hmotnostní spektrometrií

Enzyme PSM counts Pathway
6-phospho-beta-glucosidase (EC=3.2.1.86) 214 Glycolysis
Pyrophosphate–fructose 6-phosphate 1-phosphotransferase (EC=2.7.1.90) 267 Glycolysis
Fructose-bisphosphate aldolase (EC=4.1.2.13) 234 Glycolysis
Triosephosphate isomerase (EC=5.3.1.1) 473 Glycolysis
Glyceraldehyde-3-phosphate dehydrogenase (EC=1.2.1.12) 902 Glycolysis
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC=5.4.2.12) 180 Glycolysis
Enolase (EC=4.2.1.11) 261 Glycolysis
Pyruvate:ferredoxin oxidoreductase (EC=1.2.7.1) 579 Glycolysis
Pyruvate kinase (EC=2.7.1.40) 314 Glycolysis
Acetyl-CoA acetyltransferase (EC=2.3.1.9) 392 Butyrate production
Acyl-CoA dehydrogenase (EC=1.3.8.1) 464 Butyrate production
Short-chain-enoyl-CoA hydratase (EC=4.2.1.150) 312 Butyrate production
3-hydroxybutyryl-CoA dehydrogenase (EC=1.1.1.157) 342 Butyrate production
4-hydroxybutyryl-CoA dehydratase/vinylacetyl-CoA-Delta-isomerase (EC=4.2.1.120) 163 Butyrate production
NADP-specific glutamate dehydrogenase (EC=1.4.1.4) 182 Arginine biosynthesis

 

Sekvence 16S rRNA:

TTTAGAGAGTTTGATCCTGGCTCAGGATGAACGCTGGCGGCGTGCCTAACACATGCAAGTCGAACGGAGTTGTTTGAGGAAATCCTTCGGGATGGAATCTTCCAACTTAGTGGCGGACGGGTGAGTAACGCGTGAGCAATCTGCCTTTCAGAGGGGGATAACAGCCGGAAACGGCTGCTAATACCGCATAATGCATCGAATTCGCATGTTTTTGATGCCAAAGATTTTATCGCTGAAAGATGAGCTCGCGTCTGATTAGCTAGTTGGCGGGGTAACGGCCCACCAAGGCGACGATCAGTAGCCGGACTGAGAGGTTGAACGGCCACATTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGGGCAACCCTGACGCAGCAACGCCGCGTGATTGATGAAGGTCTTCGGATTGTAAAAATCTTTAATCAGGGACGAAACAAATGACGGTACCTGAAGAATAAGCTCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGCGTGTAGGCGGGCTTGTAAGTTGGAAGTGAAATCTCGGGGCTTAACCCCGAAACTGCTTTCAAAACTGCGAGTCTTGAGTGATGGAGAGGCAGGCGGAATTCCCAGTGTAGCGGTGAAATGCGTAGATATTGGGAGGAACACCAGTGGCGAAGGCGGCCTGCTGGACATTAACTGACGCTGAGGCGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGGATACTAGGTGTGGGAGGTATTGACCCCTTCCGTGCCGGAGTTAACACAATAAGTATCCCACCTGGGGAGTACGGCCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCAGTGGAGTATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAGTCTTGACATCCCGATGACCGCTCTAGAGATAGGGCTTCTCTTCGGAGCATCGGTGACAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTACGGTTAGTTGCTACGCAAGAGCACTCTAGCCGGACTGCCGTTGACAAAACGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGACTTGGGCTACACACGTACTACAATGGCAGTCATACAGAGGGAAGCAAAACCGCGAGGTGGAGCAAATCCCTAAAAGCTGTCCCAGTTCAGATTGCAGGCTGCAACTCGCCTGCATGAAGTCGGAATTGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGAGAGCCGGTAATACCCGAAGTCCGTAGTCTAACCGCAAGGAGGACGCGGCCGAAGGTAGGACTGGTAATTAGGGTGAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATCACCTCCTTT