Phascolarctobacterium faecium ET69

Firmicutes Negativicutes Selenomonadales Acidaminococcaceae

Velikost genomu: 1 885 819 bp

Obsah GC% v genomu: 45,70 %

Skenovací elektronová mikroskopie (zvětšení 20 000x)

TOP 15 enzymů exprimovaných během růstu v BHI mediu stanovené proteinovou hmotnostní spektrometrií

Enzyme PSM counts Pathway
Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 124 Glycolysis
Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) 718
Methylmalonyl-CoA mutase (EC 5.4.99.2) 514
Ethylmalonyl-CoA/methylmalonyl-CoA epimerase (EC 5.1.99.-) 112
Succinyl-CoA:coenzyme A transferase (EC 2.8.3.-) 334
Reverse rubrerythrin-1 (EC 1.11.1.1) 278
Glutamate dehydrogenase (EC 1.4.1.3) 249
Pyruvate synthase subunit PorC (EC 1.2.7.1) 225
Phosphoenolpyruvate synthase (EC 2.7.9.2) 158
Pyruvate:ferredoxin oxidoreductase (EC 1.2.7.1) 146
ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) 148
Acetyl-CoA:oxalate CoA-transferase (EC 2.8.3.19) 139
2-oxoglutarate oxidoreductase subunit KorA (EC 1.2.7.3) 123
Cobalt-precorrin-8 methylmutase (EC 5.4.99.60) 112
Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 106

 

Sekvence 16S rRNA:

GGTATATTGGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAACACATGCAAGTCGAACGGAAAATTGAGCTTCGGTTCAATTTTTAGTGGCGAACGGGTGAGTAACGCGTAGGCAACCTGCCCTTTAGACGGGGACAACATTCCGAAAGGGATGCTAATACCGGATGTGACGCTCCTATCGCATGACGGGAGCGTGAAAGATGGCCTCTACATGTAAGCTATCGCTAAAGGATGGGCCTGCGTCTGATTAGCTAGTTGGTAGTGTAACGGACAACCAAGGCGATGATCAGTAGCCGGTCTGAGAGGATGAACGGCCACATTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATCTTCCGCAATGGGCGAAAGCCTGACGGAGCAACGCCGCGTGAGTGAAGAAGGTCTTCGGATTGTAAAGCTCTGTTGTACATGACGAATGTGCCGGTTGTGAATAATGGCTGGTAATGACGGTAGTGTACGAGGAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCATGTAGGCGGCCTATTAAGTCGGGCGTGAAAATGCGGGGCTCAACCCCGTATGGCGCCCGATACTGGTGGGCTTGAGTGCAGGAGAGGAAAGGGGAATTCCCAGTGTAGCGGTGAAATGCGTAGATATTGGGAGGAACACCAGTGGCGAAGGCGCCTTTCTGGACTGTGTCTGACGCTGAGATGCGAAAGCCAGGGGAGCGAACGGGATTAGATACCCCGGTAGTCCTGGCCGTAAACGATGGGTACTAGGTGTAGGAGGTATCGACCCCTTCTGTGCCGGAGTTAACGCAATAAGTACCCCGCCTGGGGAGTACGGCCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGTATGTGGTTTAATTCGACGCAACGCGAAGAACCTTACCAGGGCTTGACATTGAGCGCCATACTAAGAGATTAGTAGTTCCCTTCGGGGACGTGAAAACAGGTGGTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTATCCTATGTTACCAGCACGTAAAGGTGGGGACTCATGGGAGACTGCCAGGGACAACCTGGAGGAAGGCGGGGATGACGTCAAGTCATCATGCCCCTTATGTCCTGGGCTACACACGTACTACAATGGTCGGCAACAGAGGGAAGCGAAGCCGCGAGGCAGAGCAAACCCCAGAAACCCGATCTCAGTTCGGATCGCAGGCTGCAACCCGCCTGCGTGAAGTCGGAATCGCTAGTAATCGCAGGTCAGCATACTGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCACGAAAGTTGGTAACACCCGAAGCCGGTGAGGTAACCTTTCAGGAGCCAGCCGTCTAAGGTGGGGCCGATGATTGGGGTGAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATCACCTCCTTTCTA