Firmicutes | Negativicutes | Selenomonadales | Veillonellaceae |
Velikost genomu: 2 396 433 bp
Obsah GC% v obsahu: 53,29 %
Skenovací elektronová mikroskopie (zvětšení 20 000x)
TOP 15 enzymů exprimovaných během růstu v BHI mediu stanovené proteinovou hmotnostní spektrometrií
Enzyme | PSM counts | Pathway |
NADP-specific glutamate dehydrogenase (EC 1.4.1.4) | 669 | |
2-oxoglutarate oxidoreductase, alpha subunit (EC 1.2.7.3) | 748 | |
2-oxoglutarate oxidoreductase, gamma subunit (EC 1.2.7.3) | 416 | |
2-oxoglutarate oxidoreductase, beta subunit (EC 1.2.7.3) | 369 | |
Acetyl-CoA acetyltransferase (EC 2.3.1.9) | 2773 | Butyrate production |
3-hydroxybutyryl-CoA dehydratase (EC 4.2.1.55) | 667 | Butyrate production |
3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) | 408 | Butyrate production |
3-hydroxybutyryl-CoA dehydrogenase (EC 1.1.1.157) | 1494 | Butyrate production |
Butyryl-CoA dehydrogenase (EC 1.3.99.2) | 3370 | Butyrate production |
4-hydroxybutyrate coenzyme A transferase (EC:2.8.3.-) | 770 | Butyrate production |
Fructose-bisphosphate aldolase class II (EC 4.1.2.13) | 244 | Glycolysis / Gluconeogenesis |
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) | 239 | Glycolysis / Gluconeogenesis |
Inosine-5′-monophosphate dehydrogenase (EC 1.1.1.205) | 260 | Purine biosynthesis |
L-lactate dehydrogenase (EC 1.1.1.27) | 729 | Pyruvate metabolism |
Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) | 632 | Pyruvate metabolism |
MS raw data: An286
kultivační médium: Wilkins-Chalgren Anaerobe Agar
Sekvence 16S rRNA:
GTTGGAGGGGTAACGGCCCACCAAGGCGACGATCAGTAGCCGGTCTGAGAGGATGAACGGCCACATTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGGGAATCTTCCGCAATGGGCGAAAGCCTGACGGAGCAACGCCGCGTGAGCGAAGACGGCCTTCGGGTTGTAAAGCTCTGTTATACGGGACGAACGGCTAGTGTGCCAATACCACATTAGAATGACGGTACCGTAAGAGAAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCGCGCAGGCGGTTTCATAAGTCTGTCTTAAAAGTGCGGGGCTTAACCCCGTGAGGGGACGGAAACTGTGAGACTGGAGTGTCGGAGAGGAAAGCGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAAGCGGCTTTCTGGACGACAACTGACGCTGAGGCGCGAAAGCCAGGGGAGCGAACGGGATTAGATACCCCGGTAGTCCTGGCCGTAAACGATGGATACTAGGTGTAGGGGGTATCGACCCCTCCTGTGCCGGAGTTAACGCAATAAGTATCCCGCCTGGGGAGTACGGCCGCAAGGCTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGTATGTGGTTTAATTCGACGCAACGCGAAGAACCTTACCAAGCCTTGACATT