Firmicutes | Bacilli | Lactobacillales | Lactobacillaceae |
Velikost genomu: 2 330 171 bp
Obsah GC% v obsahu: 38,47 %
Skenovací elektronová mikroskopie (zvětšení 20 000x)
TOP 15 enzymů exprimovaných během růstu v BHI mediu stanovené proteinovou hmotnostní spektrometrií
Enzyme | PSM counts | Pathway |
Ornithine carbamoyltransferase (EC=2.1.3.3) | 2295 | Arginine biosynthesis |
Arginine deiminase (EC=3.5.3.6) | 594 | Arginine biosynthesis |
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC=1.2.1.12) | 680 | Glycolysis / Gluconeogenesis |
Enolase (EC=4.2.1.11) | 1191 | Glycolysis / Gluconeogenesis |
L-lactate dehydrogenase (EC=1.1.1.27) | 789 | Glycolysis / Gluconeogenesis |
Pyruvate dehydrogenase (EC=1.2.4.1) | 1598 | Glycolysis / Gluconeogenesis |
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase (EC=2.3.1.12) | 688 | Glycolysis / Gluconeogenesis |
Alcohol dehydrogenase (EC=1.1.1.1) | 536 | Glycolysis / Gluconeogenesis |
Glucose-6-phosphate 1-dehydrogenase (EC=1.1.1.49) | 603 | Pentose phosphate pathway |
6-phosphogluconate dehydrogenase (EC=1.1.1.44) | 785 | Pentose phosphate pathway |
D-arabino-3-hexulose 6-phosphate formaldehyde-lyase (EC=4.1.2.43) | 4330 | Pentose phosphate pathway |
6-phospho-3-hexuloisomerase (EC=5.3.1.27) | 690 | Pentose phosphate pathway |
Xylulose-5-phosphate phosphoketolase (EC=4.1.2.9) | 937 | Pentose phosphate pathway |
Acetaldehyde dehydrogenase (EC=1.2.1.10) | 1011 | Phenylalanine metabolism |
Maltose phosphorylase (EC=2.4.1.8) | 689 | Starch and sucrose metabolism |
MS raw data: An71
kultivační médium: Wilkins-Chalgren Anaerobe Agar
Sekvence 16S rRNA:
TGAGAGTTTGATCCTGGCTCAGGATGAACGCCGGCGGTGTGCCTAATACATGCAAGTCGTACGCACTGGCCCAACTGATTGATGGTGCTTGCACCTGATTGACGATGGATTACCAGTGAGTGGCGGACGGGTGAGTAACACGTAGGTAACCTGCCCCGGAGCGGGGGATAACATTTGGAAACAGATGCTAATACCGCATAACAACAAAAGCCACATGGCTTTTGTTTGAAAGATGGCTTTGGCTATCACTCTGGGATGGACCTGCGGTGCATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGATGATGCATAGCCGAGTTGAGAGACTGATCGGCCACAATGGAACTGAGACACGGTCCATACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCACAATGGGCGCAAGCCTGATGGAGCAACACCGCGTGAGTGAAGAAGGGTTTCGGCTCGTAAAGCTCTGTTGTTGGAGAAGAACGTGCGTGAGAGTAACTGTTCACGCAGTGACGGTATCCAACCAGAAAGTCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGTTGCTTAGGTCTGATGTGAAAGCCTTCGGCTTAACCGAAGAAGTGCATCGGAAACCGGGCGACTTGAGTGCAGAAGAGGACAGTGGAACTCCATGTGTAGCGGTGGAATGCGTAGATATATGGAAGAACACCAGTGGCGAAGGCGGCTGTCTGGTCTGCAACTGACGCTGAGGCTCGAAAGCATGGGTAGCGAACAGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGAGTGCTAGGTGTTGGAGGGTTTCCGCCCTTCAGTGCCGGAGCTAACGCATTAAGCACTCCGCCTGGGGAGTACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCTACGCGAAGAACCTTACCAGGTCTTGACATCTTGCGCTAACCTTAGAGATAAGGCGTTCCCTTCGGGGACGCAATGACAGGTGGTGCATGGTCGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTTACTAGTTGCCAGCATTAAGTTGGGCACTCTAGTGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAGATCATCATGCCCCTTATGACCTGGGCTACACACGTGCTACAATGGACGGTACAACGAGTCGCAAGCTCGCGAGAGTAAGCTAATCTCTTAAAGCCGTTCTCAGTTCGGACTGTAGGCTGCAACTCGCCTACACGAAGTCGGAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTTTGTAACGCCCAAAGTCGGTGGCCTAACCTTTATGGAGGGAGCCGCCTAAGGCGGGACAGATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTT