| Firmicutes | Clostridia | Clostridiales | Ruminococcaceae |
Velikost genomu: 2 841 521 bp
Obsah GC% v obsahu: 62,40 %
Skenovací elektronová mikroskopie (zvětšení 20 000x)
TOP 15 enzymů exprimovaných během růstu v BHI mediu stanovené proteinovou hmotnostní spektrometrií
| Enzyme | PSM counts | Pathway |
| Glutamate synthase (EC=1.4.1.13) | 136 | Alanine, aspartate and glutamate metabolism |
| Acetyl-CoA acetyltransferase (EC=2.3.1.9) | 425 | Butyrate production |
| 3-hydroxybutyryl-CoA dehydrogenase (EC=1.1.1.157) | 913 | Butyrate production |
| 4-hydroxybutyryl-CoA dehydratase (EC=4.2.1.120) | 132 | Butyrate production |
| Acyl-CoA dehydrogenase (EC=1.3.8.1) | 400 | Butyrate production |
| Butyryl-CoA:acetate CoA-transferase (EC=2.8.3.8) | 156 | Butyrate production |
| L-methionine gamma-lyase (EC=4.4.1.11) | 260 | Cysteine and methionine metabolism |
| Pyrophosphate–fructose 6-phosphate 1-phosphotransferase (EC=2.7.1.90) | 171 | Glycolysis/Gluconeogenesis |
| Fructose-bisphosphate aldolase (EC=4.1.2.13) | 135 | Glycolysis/Gluconeogenesis |
| Triosephosphate isomerase (EC=5.3.1.1) | 154 | Glycolysis/Gluconeogenesis |
| Glyceraldehyde-3-phosphate dehydrogenase (EC=1.2.1.12) | 440 | Glycolysis/Gluconeogenesis |
| Enolase (EC=4.2.1.11) | 136 | Glycolysis/Gluconeogenesis |
| Pyruvate:ferredoxin oxidoreductase (EC=1.2.7.1) | 319 | Glycolysis/Gluconeogenesis |
| Pyruvate, phosphate dikinase (EC=2.7.9.1) | 195 | Glycolysis/Gluconeogenesis |
| 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase (EC=3.7.1.22) | 170 | Inositol phosphate metabolism |
MS raw data: An411
kultivační médium: Yeast Casitone Fatty Acids Agar
Sekvence 16S rRNA:
CTTAACACATGCAAGTCGAACGGAGCACCCTTGACTGAGGTTTCGGCCAAATGATAGGAATGCTTAGTGGCGGACTGGTGAGTAACGCGTGAGGAACCTGCCTTCCAGAGGGGGACAACAGTTGGAAACGACTGCTAATACCGCATGATATATTTGAGGGGCATCCCTTGGATATCAAAGATTTATCGCTGGAAGATGGCCTCGCGTCTGATTAGCTAGTAGGCGGGGTAACGGCCCACCTAGGCGACGATCAGTAGCCGGACTGAGAGGTTGACCGGCCACATTGGGACTGAGATACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGGGCAATGGGCGCAAGCCTGACCCAGCAACGCCGCGTGAAGGAAGAAGGCTTTCGGGTTGTAAACTTCTTTTGTCAGGGAACAGTAGAAGAGGGTACCTGACGAATAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGTGCAGCCGGGCTGGTAAGTCAGATGTGAAATCTGGAGGCTCAACCTCCAAACTGCATTTGAAACTGCTGGTCTTGAGTACCGGAGAGGTTATCGGAATTCCTTGTGTAGCGGTGAAATGCGTAGATATAAGGAAGAACACCAGTGGCGAAGGCGGATAACTGGACGGCAACTGACGGTGAGGCGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCTGTAAACGATGGATACTAGGTGTGCGGGGACTGACCCCCTGCGTGCCGCAGTTAACACAATAAGTATCCCACCTGGGGAGTACGATCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGATTATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGGCTTGACATCCTGCTAACGAAGTAGAGATACATCAGGTGCCCTTCGGGGAAAGCAGAGACAGGTGGTGCATGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTATTGTTAGTTGCTACGCAAGAGCACTCTAGCGAGACTGCCGTTGACAAAACGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGTCCTGGGCTACACACGTAATACAATGGCGGTCAACAGAGGGAGGCAAAGCCGCGAGGCAGAGCAAACCCCCAAAAGCCGTCCCAGTTCGGATCGCAGGCTGCAACCCGCCTGCGTGAAGTCGGAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGAGAGTCGGGAACACCCGAAGTCCGTAGCCTAACCGCAAGGGGGGCGCGGCCGAAGGTGGGTTCGATAATTGGGGTGAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATCACCTCCTTT