Bacteroidetes | Bacteroidia | Bacteroidales | Prevotellaceae |
Velikost genomu: 4 224 847 bp
Obsah GC% v genomu: 54,50 %
Skenovací elektronová mikroskopie (zvětšení 11 000x)
TOP 15 enzymů exprimovaných během růstu v BHI mediu stanovené proteinovou hmotnostní spektrometrií
Enzyme | PSM counts | Pathway |
Glycogen phosphorylase (EC 2.4.1.1) | 271 | Starch and sucrose metabolism |
Phosphoglucomutase (EC 5.4.2.2) | 223 | Glycolysis/Gluconeogenesis |
Glucokinase (EC 2.7.1.2) | 360 | Glycolysis/Gluconeogenesis |
Pyrophosphate-fructose 6-phosphate 1-phosphotransferase (EC 2.7.1.90) | 227 | Glycolysis/Gluconeogenesis |
Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) | 2206 | Glycolysis/Gluconeogenesis |
Phosphoenolpyruvate carboxykinase (EC 4.1.1.49) | 1532 | Glycolysis/Gluconeogenesis |
Pyruvate:ferredoxin oxidoreductase (EC 1.2.7.1) | 289 | Glycolysis/Gluconeogenesis |
Pyruvate, phosphate dikinase (EC 2.7.9.1) | 312 | Glycolysis/Gluconeogenesis |
Fumarate hydratase (EC 4.2.1.2) | 287 | Citrate cycle (TCA cycle) |
Fumarate reductase (EC 1.3.5.1) | 283 | Citrate cycle (TCA cycle) |
Alanine dehydrogenase (EC 1.4.1.1) | 278 | Alanine, aspartate and glutamate metabolism |
NAD-specific glutamate dehydrogenase (EC 1.4.1.2) | 217 | Arginine biosynthesis |
Phosphoserine aminotransferase (EC 2.6.1.52) | 1839 | Glycine, serine and threonine metabolism |
Propionyl-CoA carboxylase (EC 6.4.1.3) | 684 | Valine, leucine and isoleucine degradation |
Methylmalonyl-CoA mutase (EC 5.4.99.2) | 214 | Valine, leucine and isoleucine degradation |
MS raw data: ET9
Sekvence 16S rRNA:
TGAACGCTAGCTACAGGCTTAACACATGCAAGTCGAGGGGCAGCATGGCGGTTGCTTGCAACCGCCGATGGCGACCGGCGCACGGGTGAGTAACGCGTATCCAACCTGGCCGTTGCCACGGCACAGCCCGCCGAAAGGCGGATTAATGCGGTATGAGGCGCTTCGATGGCATCAGAAGAGCGCCAAAGCTTCGGCGGCAGCGGATGGGGATGCGTCCGATTAGGCAGCAGGCGGGGCAACGGCCCACCTGGCCGACGATCGGTAGGGGTCCTGAGAGGGAGGCCCCCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGGAAGCCTGAACCAGCCAAGTAGCGTGCGGGACGACGGCCCTATGGGTTGTAAACCGCTTTTTCACGGGGATAAAGTGCGCCACGTGTGGCGCTTTGCAGGTACCGTGCGAATAAGGACCGGCTAATTCCGTGCCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTATCCGGAATCATTGGGTTTAAAGGGAGCGTAGGCCGCATGTCAAGCGTGCTGTGAAATCCCGGGGCTCAACCCCGGAAGCGCAGCGCGAACTGGCGTGCTTGAGTTGCATCGAGGCAGGCGGAATTCGTGGTGTAGCGGTGAAATGCTTAGATATCACGAAGAACCCCGATTGCGAAGGCAGCCTGCCAGTTGCACACTGACGCTGATGCTCGAAGGCGCGGGTATCGAACAGGATTAGATACCCTGGTAGTCCGCGCGGTAAACGATGGATGCCCGCCCTTGGGCCGTTCTGGTTCAGGGGCCAAGCGAAAGCGTTAAGCATCCCACCTGGGGAGTACGCCGGCAACGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGAGGAACATGTGGTTTAATTCGATGATACGCGAGGAACCTTACCCGGGCTTGAACTGCAGAGGAATGTGGGAGAGATTCCACAGCCCTTCGGGGCCTCTGCGGAGGTGCTGCATGGTTGTCGTCAGCTCGTGCCGTGAGGTGTCGGCTCAAGTGCCATAACGAGCGCAACCCCCTCCCGCAGTTGCCATCGGGTGATGCCGGGCACTCTGCGGGCACTGCCGCCGCAAGGTGTGAGGAAGGCGGGGATGACGTCAAATCAGCACGGCCCTTACGTCCGGGGCTACACACGTGTTACAATGGGGCGCACAGAGGGAAGGGGCTGCGCAAGCAGTCTCGGATCGAGAAACCGCCCCTCAGTTCGGACTGGGGTCTGCAACCCGACCCCACGAAGCTGGATTCGCTAGTAATCGCGCATCAGCCATGGCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCAAGCCATGAAAGCCGGGGGCGCCTGAAGTCCGTGACCGCGAGGGTCGGCCTAGGGCGAAACCGGTGATTGGGGCTAAGTCGTAACAAGGTAGCCGTACCGGAA