Marseilla massiliensis ET9

Bacteroidetes Bacteroidia Bacteroidales Prevotellaceae

Velikost genomu: 4 224 847 bp

Obsah GC% v genomu: 54,50 %

Skenovací elektronová mikroskopie (zvětšení 11 000x)

TOP 15 enzymů exprimovaných během růstu v BHI mediu stanovené proteinovou hmotnostní spektrometrií

Enzyme PSM counts Pathway
Glycogen phosphorylase (EC 2.4.1.1) 271 Starch and sucrose metabolism
Phosphoglucomutase (EC 5.4.2.2) 223 Glycolysis/Gluconeogenesis
Glucokinase (EC 2.7.1.2) 360 Glycolysis/Gluconeogenesis
Pyrophosphate-fructose 6-phosphate 1-phosphotransferase (EC 2.7.1.90) 227 Glycolysis/Gluconeogenesis
Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 2206 Glycolysis/Gluconeogenesis
Phosphoenolpyruvate carboxykinase (EC 4.1.1.49) 1532 Glycolysis/Gluconeogenesis
Pyruvate:ferredoxin oxidoreductase (EC 1.2.7.1) 289 Glycolysis/Gluconeogenesis
Pyruvate, phosphate dikinase (EC 2.7.9.1) 312 Glycolysis/Gluconeogenesis
Fumarate hydratase (EC 4.2.1.2) 287 Citrate cycle (TCA cycle)
Fumarate reductase (EC 1.3.5.1) 283 Citrate cycle (TCA cycle)
Alanine dehydrogenase (EC 1.4.1.1) 278 Alanine, aspartate and glutamate metabolism
NAD-specific glutamate dehydrogenase (EC 1.4.1.2) 217 Arginine biosynthesis
Phosphoserine aminotransferase (EC 2.6.1.52) 1839 Glycine, serine and threonine metabolism
Propionyl-CoA carboxylase (EC 6.4.1.3) 684 Valine, leucine and isoleucine degradation
Methylmalonyl-CoA mutase (EC 5.4.99.2) 214 Valine, leucine and isoleucine degradation

MS raw data: ET9

Sekvence 16S rRNA:

TGAACGCTAGCTACAGGCTTAACACATGCAAGTCGAGGGGCAGCATGGCGGTTGCTTGCAACCGCCGATGGCGACCGGCGCACGGGTGAGTAACGCGTATCCAACCTGGCCGTTGCCACGGCACAGCCCGCCGAAAGGCGGATTAATGCGGTATGAGGCGCTTCGATGGCATCAGAAGAGCGCCAAAGCTTCGGCGGCAGCGGATGGGGATGCGTCCGATTAGGCAGCAGGCGGGGCAACGGCCCACCTGGCCGACGATCGGTAGGGGTCCTGAGAGGGAGGCCCCCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGGAAGCCTGAACCAGCCAAGTAGCGTGCGGGACGACGGCCCTATGGGTTGTAAACCGCTTTTTCACGGGGATAAAGTGCGCCACGTGTGGCGCTTTGCAGGTACCGTGCGAATAAGGACCGGCTAATTCCGTGCCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTATCCGGAATCATTGGGTTTAAAGGGAGCGTAGGCCGCATGTCAAGCGTGCTGTGAAATCCCGGGGCTCAACCCCGGAAGCGCAGCGCGAACTGGCGTGCTTGAGTTGCATCGAGGCAGGCGGAATTCGTGGTGTAGCGGTGAAATGCTTAGATATCACGAAGAACCCCGATTGCGAAGGCAGCCTGCCAGTTGCACACTGACGCTGATGCTCGAAGGCGCGGGTATCGAACAGGATTAGATACCCTGGTAGTCCGCGCGGTAAACGATGGATGCCCGCCCTTGGGCCGTTCTGGTTCAGGGGCCAAGCGAAAGCGTTAAGCATCCCACCTGGGGAGTACGCCGGCAACGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGAGGAACATGTGGTTTAATTCGATGATACGCGAGGAACCTTACCCGGGCTTGAACTGCAGAGGAATGTGGGAGAGATTCCACAGCCCTTCGGGGCCTCTGCGGAGGTGCTGCATGGTTGTCGTCAGCTCGTGCCGTGAGGTGTCGGCTCAAGTGCCATAACGAGCGCAACCCCCTCCCGCAGTTGCCATCGGGTGATGCCGGGCACTCTGCGGGCACTGCCGCCGCAAGGTGTGAGGAAGGCGGGGATGACGTCAAATCAGCACGGCCCTTACGTCCGGGGCTACACACGTGTTACAATGGGGCGCACAGAGGGAAGGGGCTGCGCAAGCAGTCTCGGATCGAGAAACCGCCCCTCAGTTCGGACTGGGGTCTGCAACCCGACCCCACGAAGCTGGATTCGCTAGTAATCGCGCATCAGCCATGGCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCAAGCCATGAAAGCCGGGGGCGCCTGAAGTCCGTGACCGCGAGGGTCGGCCTAGGGCGAAACCGGTGATTGGGGCTAAGTCGTAACAAGGTAGCCGTACCGGAA