Bacteroidetes | Bacteroidia | Bacteroidales | Bacteroidaceae |
Velikost genomu: 3 470 734 bp
Obsah GC% v obsahu: 40,90 %
Skenovací elektronová mikroskopie (zvětšení 20 000x)
TOP 15 enzymů exprimovaných během růstu v BHI mediu stanovené proteinovou hmotnostní spektrometrií
Enzyme | PSM counts | Pathway |
Glycogen phosphorylase (EC 2.4.1.1) | 301 | Starch and sucrose metabolism |
Galactokinase (EC 2.7.1.6) | 155 | Galactose metabolism |
Phosphoglucomutase (EC 5.4.2.2) | 148 | Glycolysis/Gluconeogenesis |
Fructose 6-phosphate-1-kinase (EC 2.7.1.90) | 255 | Glycolysis/Gluconeogenesis |
Fructose-bisphosphate aldolase (EC 4.1.2.13) | 277 | Glycolysis/Gluconeogenesis |
Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) | 386 | Glycolysis/Gluconeogenesis |
Phosphoglycerate kinase (EC 2.7.2.3) | 205 | Glycolysis/Gluconeogenesis |
Phosphoenolpyruvate carboxykinase (EC 4.1.1.49) | 416 | Glycolysis/Gluconeogenesis |
Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.1) | 515 | Glycolysis/Gluconeogenesis |
Pyruvate formate-lyase (EC 2.3.1.54) | 143 | Pyruvate metabolism |
Malate dehydrogenase (EC 1.1.1.37) | 186 | Citrate cycle (TCA cycle) |
Fumarate hydratase (EC 4.2.1.2) | 178 | Citrate cycle (TCA cycle) |
Succinate dehydrogenase (EC 1.3.5.1) | 438 | Citrate cycle (TCA cycle) |
Acetyl-coenzyme A carboxyl transferase (EC 6.4.1.2) | 130 | Fatty acid biosynthesis |
ATP synthase (EC 7.1.2.2) | 336 | Oxidative phosphorylation |
MS raw data: An406
kultivační médium: Yeast Casitone Fatty Acids Agar
Sekvence 16S rRNA:
GAAGAGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATGCAAGTCGAGGGGCAGCGGGATTGAAGCTTGCTTCAATCGCCGGCGACCGGCGCACGGGTGAGTAACGCGTATCCAACCTTCCGTTTACTCGGGGATAGCCTTTCGAAAGAAAGATTAATACCCGATGGTATCGTAAGAACGCATGGACTTAAGATTAAAGATTTATCGGTAAACGATGGGGATGCGTTCCATTAGGTAGTAGGCGGGGTAACGGCCCACCTAGCCGACGATGGATAGGGGTTCTGAGAGGAAGGTCCCCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAACCAGCCAAGTAGCGTGAAGGATGAAGGTTCTATGGATTGTAAACTTCTTTTATAAGGGAATAAAGTGCTTTACGTGTAGAGTTTTGTATGTACCTTATGAATAAGCATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGACGGGATGTTAAGTCAGCTGTGAAAGTTTGGGGCTCAACCTTAAAATTGCAGTTGAAACTGGCGTTCTTGAGTGCGGCAGAGGCAGGCGGAATTCGTGGTGTAGCGGTGAAATGCTTAGATATCACGAAGAACCCCTATTGCGAAGGCAGCCTGCTGGACCGTAACTGACGTTGATGCTCGAAAGTGTGGGTATCAAACAGGATTAGATACCCTGGTAGTCCACACGGTAAACGATGGATACTCGCTGTTGGCGATACACGGTCAGCGGCCAAGCGAAAGCATTAAGTATCCCACCTGGGGAGTACGCCGGCAACGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGAGGAACATGTGGTTTAATTCGATGATACGCGAGGAACCTTACCCGGGCTTAAATTATGCATGAATCATCTGGAGACAGATGAGCCGCAAGGCATGTATGAAGGTGCTGCATGGTTGTCGTCAGCTCGTGCCGTGAGGTGTCGGCTTAAGTGCCATAACGAGCGCAACCCTTTCTGCCAGTTACTAACAGGCAATGCTGAGGACTCTGGCGGTACTGCCATCGTAAGATGTGAGGAAGGTGGGGATGACGTCAAATCAGCACGGCCCTTACGTCCGGGGCTACACACGTGTTACAATGGGGGGTACAGAAGGCCGCTTGCCGGCGACGGCTGGCCAATCCTCAAATCCCCTCTCAGTTCGGACTGGAGTCTGCAACCCGACTCCACGAAGCTGGATTCGCTAGTAATCGCGCATCAGCCACGGCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCAAGCCATGAAAGCCGGGAGTACCTGAAGTGCGTAACCGCGAGGAGCGCCCTAGGGTAACACTGGTAATTGGGGCTAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAACACCTCCTTT