Bacteroides caecigallinarum An406

Bacteroidetes Bacteroidia Bacteroidales Bacteroidaceae

Velikost genomu: 3 470 734  bp

Obsah GC% v obsahu: 40,90 %

Skenovací elektronová mikroskopie (zvětšení 20 000x)

 

TOP 15 enzymů exprimovaných během růstu v BHI mediu stanovené proteinovou hmotnostní spektrometrií

Enzyme PSM counts Pathway
Glycogen phosphorylase (EC 2.4.1.1) 301 Starch and sucrose metabolism
Galactokinase (EC 2.7.1.6) 155 Galactose metabolism
Phosphoglucomutase (EC 5.4.2.2) 148 Glycolysis/Gluconeogenesis
Fructose 6-phosphate-1-kinase (EC 2.7.1.90) 255 Glycolysis/Gluconeogenesis
Fructose-bisphosphate aldolase (EC 4.1.2.13) 277 Glycolysis/Gluconeogenesis
Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 386 Glycolysis/Gluconeogenesis
Phosphoglycerate kinase (EC 2.7.2.3) 205 Glycolysis/Gluconeogenesis
Phosphoenolpyruvate carboxykinase (EC 4.1.1.49) 416 Glycolysis/Gluconeogenesis
Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.1) 515 Glycolysis/Gluconeogenesis
Pyruvate formate-lyase (EC 2.3.1.54) 143 Pyruvate metabolism
Malate dehydrogenase (EC 1.1.1.37) 186 Citrate cycle (TCA cycle)
Fumarate hydratase (EC 4.2.1.2) 178 Citrate cycle (TCA cycle)
Succinate dehydrogenase (EC 1.3.5.1) 438 Citrate cycle (TCA cycle)
Acetyl-coenzyme A carboxyl transferase (EC 6.4.1.2) 130 Fatty acid biosynthesis
ATP synthase (EC 7.1.2.2) 336 Oxidative phosphorylation

MS raw data: An406

kultivační médium: Yeast Casitone Fatty Acids Agar

Sekvence 16S rRNA:

GAAGAGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATGCAAGTCGAGGGGCAGCGGGATTGAAGCTTGCTTCAATCGCCGGCGACCGGCGCACGGGTGAGTAACGCGTATCCAACCTTCCGTTTACTCGGGGATAGCCTTTCGAAAGAAAGATTAATACCCGATGGTATCGTAAGAACGCATGGACTTAAGATTAAAGATTTATCGGTAAACGATGGGGATGCGTTCCATTAGGTAGTAGGCGGGGTAACGGCCCACCTAGCCGACGATGGATAGGGGTTCTGAGAGGAAGGTCCCCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGACGAGAGTCTGAACCAGCCAAGTAGCGTGAAGGATGAAGGTTCTATGGATTGTAAACTTCTTTTATAAGGGAATAAAGTGCTTTACGTGTAGAGTTTTGTATGTACCTTATGAATAAGCATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGACGGGATGTTAAGTCAGCTGTGAAAGTTTGGGGCTCAACCTTAAAATTGCAGTTGAAACTGGCGTTCTTGAGTGCGGCAGAGGCAGGCGGAATTCGTGGTGTAGCGGTGAAATGCTTAGATATCACGAAGAACCCCTATTGCGAAGGCAGCCTGCTGGACCGTAACTGACGTTGATGCTCGAAAGTGTGGGTATCAAACAGGATTAGATACCCTGGTAGTCCACACGGTAAACGATGGATACTCGCTGTTGGCGATACACGGTCAGCGGCCAAGCGAAAGCATTAAGTATCCCACCTGGGGAGTACGCCGGCAACGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGAGGAACATGTGGTTTAATTCGATGATACGCGAGGAACCTTACCCGGGCTTAAATTATGCATGAATCATCTGGAGACAGATGAGCCGCAAGGCATGTATGAAGGTGCTGCATGGTTGTCGTCAGCTCGTGCCGTGAGGTGTCGGCTTAAGTGCCATAACGAGCGCAACCCTTTCTGCCAGTTACTAACAGGCAATGCTGAGGACTCTGGCGGTACTGCCATCGTAAGATGTGAGGAAGGTGGGGATGACGTCAAATCAGCACGGCCCTTACGTCCGGGGCTACACACGTGTTACAATGGGGGGTACAGAAGGCCGCTTGCCGGCGACGGCTGGCCAATCCTCAAATCCCCTCTCAGTTCGGACTGGAGTCTGCAACCCGACTCCACGAAGCTGGATTCGCTAGTAATCGCGCATCAGCCACGGCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCAAGCCATGAAAGCCGGGAGTACCTGAAGTGCGTAACCGCGAGGAGCGCCCTAGGGTAACACTGGTAATTGGGGCTAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAACACCTCCTTT