Bacteroides coprocola An767

Bacteroidetes Bacteroidia Bacteroidales Bacteroidaceae

Velikost genomu: 3 855 141 bp

Obsah GC% v obsahu: 41,00 %

Skenovací elektronová mikroskopie (zvětšení 20 000x)

 

TOP 15 enzymů exprimovaných během růstu v BHI mediu stanovené proteinovou hmotnostní spektrometrií

Enzyme PSM counts Pathway
Phosphoglucomutase (EC 5.4.2.2) 313 Glycolysis/Gluconeogenesis
Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90) 273 Glycolysis/Gluconeogenesis
Fructose-bisphosphate aldolase (EC 4.1.2.13) 366 Glycolysis/Gluconeogenesis
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) 3068 Glycolysis/Gluconeogenesis
Phosphoglycerate kinase (EC 2.7.2.3) 547 Glycolysis/Gluconeogenesis
Enolase (EC 4.2.1.11) 467 Glycolysis/Gluconeogenesis
Phosphoenolpyruvate carboxykinase (EC 4.1.1.49) 631 Glycolysis/Gluconeogenesis
Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.1) 455 Glycolysis/Gluconeogenesis
Pyruvate formate-lyase (EC 2.3.1.54) 262 Pyruvate metabolism
Succinate dehydrogenase (EC 1.3.5.1) 234 Citrate cycle (TCA cycle)
Fumarate hydratase (EC 4.2.1.2) 342 Citrate cycle (TCA cycle)
Cysteine synthase (EC 2.5.1.47) 444 Cysteine and methionine metabolism
O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) 259 Cysteine and methionine metabolism
Meso-diaminopimelate D-dehydrogenase (EC 1.4.1.16) 632 Lysine biosynthesis
ATP synthase (EC 7.1.2.2) 318 Oxidative phosphorylation

 

MS raw data: An767

Sekvence 16S rRNA:

GAAGAGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATGCAAGTCGAGGGGCAGCATGAACTTAGCTTGCTAAGTTTGATGGCGACCGGCGCACGGGTGAGTAACACGTATCCAACCTTCCGTTTACTCAGGGATAGCCTTTCGAAAGAAAGATTAATACCTGATAGTATGGTGAGATTGCATGATAGCACCATTAAAGATTTATTGGTAAACGATGGGGATGCGTTCCATTAGGTAGTAGGCGGGGTAACGGCCCACCTAGCCGACGATGGATAGGGGTTCTGAGAGGAAGGTCCCCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGAGAGCCTGAACCAGCCAAGTAGCGTGAAGGATGAAGGTCCTACGGATTGTAAACTTCTTTTATACGGGAATAAAGTATCCTACGTGTAGGATTTTGTATGTACCGTATGAATAAGCATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGCAGACGGGAGATTAAGTCAGTTGTGAAAGTTTGCGGCTCAACCGTAAAATTGCAGTTGATACTGGTTTCCTTGAGTGCAGTTGAGGCAGGCGGAATTCGTGGTGTAGCGGTGAAATGCTTAGATATCACGAAGAACCCCGATTGCGAAGGCAGCTTGCTAAACTGTAACTGACGTTCATGCTCGAAAGTGTGGGTATCAAACAGGATTAGATACCCTGGTAGTCCACACGGTAAACGATGGATACTCGCTGTTGGCGATATACTGTCAGCGGCCAAGCGAAAGCATTAAGTATCCCACCTGGGGAGTACGCCGGCAACGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGAGGAACATGTGGTTTAATTCGATGATACGCGAGGAACCTTACCCGGGCTTAAATTGCAGACGAATTACCTGGAAACAGGTAAGCCGCAAGGCGTCTGTGAAGGTGCTGCATGGTTGTCGTCAGCTCGTGCCGTGAGGTGTCGGCTTAAGTGCCATAACGAGCGCAACCCTCGTGGTCAGTTACTAACAGGTAACGCTGAGGACTCTGGCCAGACTGCCATCGTAAGATGTGAGGAAGGTGGGGATGACGTCAAATCAGCACGGCCCTTACGTCCGGGGCTACACACGTGTTACAATGGGAGGTACAGAAGGCCGCTACCCGGCGACGGGATGCCAATCCCCAAAACCTCTCTCAGTTCGGACTGGAGTCTGCAACCCGACTCCACGAAGCTGGATTCGCTAGTAATCGCGCATCAGCCACGGCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCAAGCCATGAAAGCCGGGGGTACCTGAAGTGCGTAACCGCAAGGAGCGCCCTAGGGTAAAACCGGTAATTGGGGCTAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAACACCTCCTTT