Lactobacillus alvi An810

Firmicutes Bacilli Lactobacillales Lactobacillaceae

Velikost genomu: 1 965 443 bp

Obsah GC% v obsahu: 42,60 %

Skenovací elektronová mikroskopie (zvětšení 20 000x)

 

TOP 15 enzymů exprimovaných během růstu v BHI mediu stanovené proteinovou hmotnostní spektrometrií

Enzyme PSM counts Pathway
Aldehyde-alcohol dehydrogenase (EC=1.1.1.1) 410 Glycolysis / Gluconeogenesis
Glyceraldehyde-3-phosphate dehydrogenase (EC=1.2.1.12) 92 Glycolysis / Gluconeogenesis
Enolase 2 (EC=4.2.1.11) 83 Glycolysis / Gluconeogenesis
Phosphoglycerate kinase (EC=2.7.2.3) 66 Glycolysis / Gluconeogenesis
Pyruvate kinase (EC=2.7.1.40) 57 Glycolysis / Gluconeogenesis
Pyruvate dehydrogenase E1 component subunit alpha (EC=1.2.4.1) 48 Glycolysis / Gluconeogenesis
Alcohol dehydrogenase 1 (EC=1.1.1.1) 39 Glycolysis / Gluconeogenesis
Carbamate kinase 1 (EC=2.7.2.2) 42 Arginine biosynthesis
Glutamine synthetase (EC=6.3.1.2) 40 Arginine biosynthesis
Arginine deiminase (EC=3.5.3.6) 33 Arginine biosynthesis
3-oxoacyl-[acyl-carrier-protein] reductase (EC=1.1.1.100) 38 Fatty acid biosynthesis
Respiratory nitrate reductase 1 alpha chain (EC=1.7.5.1) 123 Nitrogen metabolism
Xylulose-5-phosphate phosphoketolase (EC=4.1.2.9) 146 Pentose phosphate pathway
6-phosphogluconate dehydrogenase, decarboxylating (EC=1.1.1.44) 131 Pentose phosphate pathway
Glucose-6-phosphate 1-dehydrogenase (EC=1.1.1.363) 47 Pentose phosphate pathway
D-lactate dehydrogenase (EC=1.1.1.28) 37 Pyruvate metabolism
ATP-dependent zinc metalloprotease (EC=3.4.24.-) 89
Foldase protein (EC=5.2.1.8) 52
Dihydrolipoyl dehydrogenase (EC=1.8.1.4) 39
Asparagine synthetase [glutamine-hydrolyzing] 1 (EC=6.3.5.4) 33

 

Sekvence 16S rRNA:

TATGAGAGTTTGATCCTGGCTCAGGATGAACGCCGGCGGTGTGCCTAATACATGCAAGTCGTACGCGTTGGCCCAACTGATTGATGATGCTTGCATCTGATTGACGTTGGTTTACCAACGAGTGGCGGACGGGTGAGTAACACGTAGGCAACCTGCCCAGAAGCGGGGGACAACATTTGGAAACAAGTGCTAATACCGCATAACAACATTAACCGCCTGGTTAATGTTTAAAAGATGGTTTCGGCTATCACTTCTGGATGGGCCTGCGGCGCATTAGCTTGTTGGTAAGGTAATGGCTTACCAAGGCAATGATGCGTAGCCGAGTTGAGAGACTGATCGGCCACAATGGAACTGAGACACGGTCCATACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCACAATGGGCGCAAGCCTGATGGAGCAACACCGCGTGAGTGAAGAAGGGTTTCGGCTCGTAAAGCTCTGTTGTTGAAGAAGAACATGCTAGAGAGTAACTGTTCTAGTATTGACGGTATTCAACCAGAAAGTCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGTTTTCTAAGTCTGATGTGAAAGCCTTCGGCTTAACCGAAGAAGTGCATCGGAAACTGGATGACTTGAGTGCAGAAGAGGGCAGTGGAACTCCATGTGTAGCGGTGGAATGCGTAGATATATGGAAGAACACCAGTGGCGAAGGCGGCTGCCTGGTCTGCAACTGACGCTGAGGCTCGAAAGCATGGGTAGCGAACAGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGAGTGCTAGGTGTTGGAGGGTTTCCGCCCTTCAGTGCCGCAGCTAACGCATTAAGCACTCCGCCTGGGGAGTACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCTACGCGAAGAACCTTACCAGGTCTTGACATCTTGCGCCAACCCTAGAGATAGGGCGTTCCCTTCGGGGACGCAATGACAGGTGGTGCATGGTCGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTTACTAGTTGCCAGCATTTAGTTGGGCACTCTAGTGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAGATCATCATGCCCCTTATGACCTGGGCTACACACGTGCTACAATGGACGGTACAACGAGTTGCGAACTCGCGAGGGCAAGCTAATCTCTTAAAACCGTTCTCAGTTCGGACTGCAGTCTGCAACTCGACTGCACGAAGTCGGAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGGGAGTTTGCAATGCCCAAAGTCGGTGGGGTAACCTTTTGGAGCCAGCCGCCTAAGGCAGGGCAGATGACTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTT