Firmicutes | Bacilli | Lactobacillales | Lactobacillaceae |
Velikost genomu: 1 786 561 bp
Obsah GC% v genomu: 34,60 %
Skenovací elektronová mikroskopie (zvětšení 4 500x)
TOP 15 enzymů exprimovaných během růstu v BHI mediu stanovené proteinovou hmotnostní spektrometrií
Enzyme | PSM counts | Pathway |
L-asparaginase (EC 3.5.1.1) | 73 | Alanine, aspartate and glutamate metabolism |
Glutamine synthetase type I (EC 6.3.1.2) | 59 | Arginine biosynthesis |
N-acetylglucosamine kinase (EC 2.7.1.59) | 96 | Amino sugar and nucleotide sugar metabolism |
Phosphoglucosamine mutase (EC 5.4.2.10) | 79 | Amino sugar and nucleotide sugar metabolism |
Glucose-6-phosphate isomerase (EC 5.3.1.9) | 66 | Glycolysis/Gluconeogenesis |
Fructose-bisphosphate aldolase class II (EC 4.1.2.13) | 120 | Glycolysis/Gluconeogenesis |
Triosephosphate isomerase (EC 5.3.1.1) | 187 | Glycolysis/Gluconeogenesis |
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) | 255 | Glycolysis/Gluconeogenesis |
Phosphoglycerate kinase (EC 2.7.2.3) | 188 | Glycolysis/Gluconeogenesis |
Phosphoglycerate mutase (EC 5.4.2.11) | 194 | Glycolysis/Gluconeogenesis |
Enolase (EC 4.2.1.11) | 194 | Glycolysis/Gluconeogenesis |
Pyruvate kinase (EC 2.7.1.40) | 259 | Glycolysis/Gluconeogenesis |
L-lactate dehydrogenase (EC 1.1.1.27) | 127 | Glycolysis/Gluconeogenesis |
ATP synthase beta chain (EC 3.6.3.14) | 180 | Oxidative phosphorylation |
Xylulose-5-phosphate phosphoketolase (EC 4.1.2.9) | 58 | Pentose phosphate pathway |
MS raw data: An197
kultivační médium: Wilkins-Chalgren Anaerobe Agar
Sekvence 16S rRNA:
TGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAGCGAGCTTGCCTAGATGATTTTAGTGCTTGCACTAAATGAAACTAGATACAAGCGAGCGGCGGACGGGTGAGTAACACGTGGGTAACCTGCCCAAGAGACTGGGATAACACCTGGAAACAGATGCTAATACCGGATAACAACACTAGACGCATGTCTAGAGTTTGAAAGATGGTTCTGCTATCACTCTTGGATGGACCTGCGGTGCATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCAATGATGCATAGCCGAGTTGAGAGACTGATCGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCACAATGGACGAAAGTCTGATGGAGCAACGCCGCGTGAGTGAAGAAGGGTTTCGGCTCGTAAAGCTCTGTTGGTAGTGAAGAAAGATAGAGGTAGTAACTGGCCTTTATTTGACGGTAATTACTTAGAAAGTCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGTGCAGGCGGTTCAATAAGTCTGATGTGAAAGCCTTCGGCTCAACCGGAGAATTGCATCAGAAACTGTTGAACTTGAGTGCAGAAGAGGAGAGTGGAACTCCATGTGTAGCGGTGGAATGCGTAGATATATGGAAGAACACCAGTGGCGAAGGCGGCTCTCTGGTCTGCAACTGACGCTGAGGCTCGAAAGCATGGGTAGCGAACAGGATTAGATACCCTGGTAGTCCATGCCGTAAACGATGAGTGCTAAGTGTTGGGAGGTTTCCGCCTCTCAGTGCTGCAGCTAACGCATTAAGCACTCCGCCTGGGGAGTACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGTCTTGACATCCAGTGCAAACCTAAGAGATTAGGTGTTCCCTTCGGGGACGCTGAGACAGGTGGTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCATTAGTTGCCATCATTAAGTTGGGCACTCTAATGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCATCATGCCCCTTATGACCTGGGCTACACACGTGCTACAATGGACGGTACAACGAGAAGCGAACCTGCGAAGGCAAGCGGATCTCTTAAAGCCGTTCTCAGTTCGGACTGTAGGCTGCAACTCGCCTACACGAAGCTGGAATCGCTAGTAATCGCGGATCAGCACGCCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGAGAGTCTGTAACACCCAAAGCCGGTGGGATAACCTTTATAGGAGTCAGCCGTCTAAGGTAGGACAGATGATTAGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTT