Firmicutes | Bacilli | Lactobacillales | Lactobacillaceae |
Velikost genomu: 1 826 390 bp
Obsah GC% v genomu: 32,76 %
Skenovací elektronová mikroskopie (zvětšení 20 000x)
TOP 15 enzymů exprimovaných během růstu v BHI mediu stanovené proteinovou hmotnostní spektrometrií
Enzyme | PSM counts | Pathway |
D-arabitol-phosphate dehydrogenase (EC=1.1.1.301) | 74 | Saccharide degradation |
Beta-galactosidase (EC=3.2.1.23) | 110 | Saccharide degradation |
Alpha-galactosidase (EC=3.2.1.22) | 103 | Saccharide degradation |
Phosphoglucomutase (EC=5.4.2.2) | 95 | Glycolysis / Gluconeogenesis |
Fructose-bisphosphate aldolase (EC=4.1.2.13) | 83 | Glycolysis / Gluconeogenesis |
Glyceraldehyde-3-phosphate dehydrogenase (EC=1.2.1.12) | 140 | Glycolysis / Gluconeogenesis |
Enolase (EC=4.2.1.11) | 140 | Glycolysis / Gluconeogenesis |
Formate acetyltransferase (EC=2.3.1.54) | 237 | Glycolysis / Gluconeogenesis |
Pyruvate kinase (EC=2.7.1.40) | 215 | Glycolysis / Gluconeogenesis |
Aldehyde-alcohol dehydrogenase (EC=1.1.1.1) | 214 | Glycolysis / Gluconeogenesis |
Xylulose-5-phosphate phosphoketolase (EC=4.1.2.9) | 165 | Pentose phosphate pathway |
Glucose-6-phosphate 1-dehydrogenase (EC=1.1.1.49) | 71 | Pentose phosphate pathway |
Pyruvate carboxylase (EC=6.4.1.1) | 87 | Citrate cycle (TCA cycle) |
Glutamine synthetase (EC=6.3.1.2) | 83 | Arginine biosynthesis |
Asparagine synthetase (EC=6.3.5.4) | 76 | Alanine, aspartate and glutamate metabolism |
MS raw data: An63
kultivační médium: Wilkins-Chalgren Anaerobe Agar
Sekvence 16S rRNA:
AATGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAAACTTTCTTACACCGAATGCTTGCATTCAcCGTAAGAAGTTGAGTGGCGGACGGGTGAGTAACACGTGGGTAACCTGCCTAAAAGAAGGGGATAACACTTGGAAACAGGTGCTAATACCGTATaTCTCTaAGGaTCGCATGAtccTTAGAtGAAAGATGGTTCTGCTATCGcTTTTAGATGGACCCGCGGCGTATTAACTAGTTGGTGGGGTAACGGCCTACCAAGGTGATGATACGTAGCCGAACTGAGAGGTTGATCGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCACAATGGACGCAAGTCTGATGGAGCAACGCCGCGTGAGTGAAGAAGGTCTTCGGATCGTAAAACTCTGTTGTTAGAGAAGAACACGAGTGAGAGTAACTGTTCATTCGATGACGGTATCTAACCAGCAAGTCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGGGAACGCAGGCGGTCTTTTAAGTCTGATGTGAAAGCCTTCGGCTTAACcGGAGTAGTGCATTGGAAACTGGAAGACTTGAGTGCAGAAGAGGAGAGTGGAACTCCATGTGTAGCGGTGAAATGCGTAGATATATGGAAGAACACCAGTGGCGAAAGCGGCTCTCTGGTCTGTAACTGACGCTGAGGTTCGAAAGCGTGGGTAGCAAACAgGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATGCTAGGTGTTGGAGGGTTTCCgCCCTTCAGTGCCGCAGCTAACGCAATAAGCATTCCGCCTGGGGAGTACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGTCTTGACATCCTTTGACCACCTAAGAGATTAGGtTTTCCtTTCGGGGACAAAGTGACAGGTGGTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTTGTCAGTTGCCAGCATTAAGTTGGGCACTCTGGCGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGCCCCTTATGACCTGGGCTACACACGTGCTACAATGGACGGTACAACGAGTCGCaAGACCGCGAGGTTTAGCTAATCTCTTAAAGCCGTTCTCAGTTCGGATTGTAGGCTGCAACTCGCCTACATGAAGTCGGAATCGCTAGTAATCGCGAATCAGCATGTCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGAGAGTTTGTAACACCCAAAGCCGGTGGGGTAACCGCAAGGAGCCAGCCGTCTAAGGTGGGACAGATGATTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTT