Ligilactobacillus (Lactobacillus) salivarius An63

Firmicutes Bacilli Lactobacillales Lactobacillaceae

Velikost genomu: 1 826 390 bp

Obsah GC% v genomu: 32,76 %

Skenovací elektronová mikroskopie (zvětšení 20 000x)

 

TOP 15 enzymů exprimovaných během růstu v BHI mediu stanovené proteinovou hmotnostní spektrometrií

Enzyme PSM counts Pathway
D-arabitol-phosphate dehydrogenase (EC=1.1.1.301) 74 Saccharide degradation
Beta-galactosidase (EC=3.2.1.23) 110 Saccharide degradation
Alpha-galactosidase (EC=3.2.1.22) 103 Saccharide degradation
Phosphoglucomutase (EC=5.4.2.2) 95 Glycolysis / Gluconeogenesis
Fructose-bisphosphate aldolase (EC=4.1.2.13) 83 Glycolysis / Gluconeogenesis
Glyceraldehyde-3-phosphate dehydrogenase (EC=1.2.1.12) 140 Glycolysis / Gluconeogenesis
Enolase (EC=4.2.1.11) 140 Glycolysis / Gluconeogenesis
Formate acetyltransferase (EC=2.3.1.54) 237 Glycolysis / Gluconeogenesis
Pyruvate kinase (EC=2.7.1.40) 215 Glycolysis / Gluconeogenesis
Aldehyde-alcohol dehydrogenase (EC=1.1.1.1) 214 Glycolysis / Gluconeogenesis
Xylulose-5-phosphate phosphoketolase (EC=4.1.2.9) 165 Pentose phosphate pathway
Glucose-6-phosphate 1-dehydrogenase (EC=1.1.1.49) 71 Pentose phosphate pathway
Pyruvate carboxylase (EC=6.4.1.1) 87 Citrate cycle (TCA cycle)
Glutamine synthetase (EC=6.3.1.2) 83 Arginine biosynthesis
Asparagine synthetase (EC=6.3.5.4) 76 Alanine, aspartate and glutamate metabolism

MS raw data: An63

kultivační médium: Wilkins-Chalgren Anaerobe Agar

Sekvence 16S rRNA:

AATGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAATACATGCAAGTCGAACGAAACTTTCTTACACCGAATGCTTGCATTCAcCGTAAGAAGTTGAGTGGCGGACGGGTGAGTAACACGTGGGTAACCTGCCTAAAAGAAGGGGATAACACTTGGAAACAGGTGCTAATACCGTATaTCTCTaAGGaTCGCATGAtccTTAGAtGAAAGATGGTTCTGCTATCGcTTTTAGATGGACCCGCGGCGTATTAACTAGTTGGTGGGGTAACGGCCTACCAAGGTGATGATACGTAGCCGAACTGAGAGGTTGATCGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCACAATGGACGCAAGTCTGATGGAGCAACGCCGCGTGAGTGAAGAAGGTCTTCGGATCGTAAAACTCTGTTGTTAGAGAAGAACACGAGTGAGAGTAACTGTTCATTCGATGACGGTATCTAACCAGCAAGTCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGGGAACGCAGGCGGTCTTTTAAGTCTGATGTGAAAGCCTTCGGCTTAACcGGAGTAGTGCATTGGAAACTGGAAGACTTGAGTGCAGAAGAGGAGAGTGGAACTCCATGTGTAGCGGTGAAATGCGTAGATATATGGAAGAACACCAGTGGCGAAAGCGGCTCTCTGGTCTGTAACTGACGCTGAGGTTCGAAAGCGTGGGTAGCAAACAgGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATGCTAGGTGTTGGAGGGTTTCCgCCCTTCAGTGCCGCAGCTAACGCAATAAGCATTCCGCCTGGGGAGTACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGTCTTGACATCCTTTGACCACCTAAGAGATTAGGtTTTCCtTTCGGGGACAAAGTGACAGGTGGTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTTGTCAGTTGCCAGCATTAAGTTGGGCACTCTGGCGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGCCCCTTATGACCTGGGCTACACACGTGCTACAATGGACGGTACAACGAGTCGCaAGACCGCGAGGTTTAGCTAATCTCTTAAAGCCGTTCTCAGTTCGGATTGTAGGCTGCAACTCGCCTACATGAAGTCGGAATCGCTAGTAATCGCGAATCAGCATGTCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCACACCATGAGAGTTTGTAACACCCAAAGCCGGTGGGGTAACCGCAAGGAGCCAGCCGTCTAAGGTGGGACAGATGATTGGGGTGAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATCACCTCCTTT