Marseilla massiliensis An819

Bacteroidetes  Bacteroidia Bacteroidales Prevotellaceae

Velikost genomu: 4  148  582 bp

Obsah GC% v genomu: 54,70 %

Skenovací elektronová mikroskopie (zvětšení 20 000x)

 

TOP 15 enzymů exprimovaných během růstu v BHI mediu stanovené proteinovou hmotnostní spektrometrií

Enzyme PSM counts Pathway
Alanine dehydrogenase (EC=1.4.1.1) 324 Alanine, aspartate and glutamate metabolism
NAD-specific glutamate dehydrogenase (EC=1.4.1.2) 234 Arginine biosynthesis
Fumarate hydratase class I, aerobic (EC=4.2.1.2) 247 Citrate cycle (TCA cycle)
Phosphoserine aminotransferase (EC=2.6.1.52) 1759 Glycine, serine and threonine metabolism
Glyceraldehyde-3-phosphate dehydrogenase A (EC=1.2.1.12) 2355 Glycolysis
Phosphoenolpyruvate carboxykinase (ATP) (EC=4.1.1.49) 2123 Glycolysis
Glucokinase (EC=2.7.1.2) 523 Glycolysis
Pyruvate:ferredoxin oxidoreductase (EC=1.2.7.1) 259 Glycolysis
Fructose-bisphosphate aldolase (EC=4.1.2.13) 242 Glycolysis
Pyruvate, phosphate dikinase (EC=2.7.9.1) 221 Glycolysis
Phosphoglucomutase (EC=5.4.2.2) 214 Glycolysis
Inosine-5′-monophosphate dehydrogenase (EC=1.1.1.205) 445 Nucleotide metabolism
Glycogen phosphorylase (EC=2.4.1.1) 242 Starch and sucrose metabolism
Propionyl-CoA carboxylase beta chain (EC=6.4.1.3) 900 Valine, leucine and isoleucine degradation
Fumarate reductase flavoprotein subunit (EC=1.3.5.4) 316

 

Sekvence 16S rRNA:

ATGTAGAGTTTGATCCTGGCTCAGGATGAACGCTAGCTACAGGCTTAACACATGCAAGTCGAGGGGCATCATGGCGGTTGCTTGCAACCGCCGATGGCGACCGGCGCACGGGTGAGTAACGCGTATCCAACCTGGCCGTTGCCACGGCACAGCCCGCCGAAAGGCGGATTAATGCGGTATGAGGCGCTTCGATGGCATCAGAAGAGCGCCAAAGCTTCGGCGGCAGCGGATGGGGATGCGTCCGATTAGGCAGCAGGCGGGGCAACGGCCCACCTGGCCGACGATCGGTAGGGGTCCTGAGAGGGAGGCCCCCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGGCGGAAGCCTGAACCAGCCAAGTAGCGTGCGGGATGACGGCCCTATGGGTTGTAAACCGCTTTTTCACGGGGATAAAGTGCGCCACGTGTGGCGCTTTGCAGGTACCGTGCGAATAAGGACCGGCTAATTCCGTGCCAGCAGCCGCGGTAATACGGAAGGTCCGGGCGTTATCCGGAATCATTGGGTTTAAAGGGAGCGTAGGCCGCATGTCAAGCGTGCTGTGAAATCCCGGGGCTCAACCCCGGAAGCGCAGCGCGAACTGGCGTGCTTGAGTTGCATCGAGGCAGGCGGAATTCGTGGTGTAGCGGTGAAATGCTTAGATATCACGAAGAACCCCGATTGCGAAGGCAGCCTGCCAGTTGCACACTGACGCTGATGCTCGAAGGCGCGGGTATCGAACAGGATTAGATACCCTGGTAGTCCGCGCGGTAAACGATGGATGCCCGCCCTTGGGCCGTTAAGGTTCAGGGGCCAAGCGAAAGCGTTAAGCATCCCACCTGGGGAGTACGCCGGCAACGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGAGGAACATGTGGTTTAATTCGATGATACGCGAGGAACCTTACCCGGGCTTGAACTGCAGAGGAATGTGGGAGAGATTCCACAGCCCTTCGGGGCCTCTGCGGAGGTGCTGCATGGTTGTCGTCAGCTCGTGCCGTGAGGTGTCGGCTCAAGTGCCATAACGAGCGCAACCCCCTCCCGCAGTTGCCATCGGGTAATGCCGGGCACTCTGCGGGCACTGCCGCCGCAAGGTGTGAGGAAGGCGGGGATGACGTCAAATCAGCACGGCCCTTACGTCCGGGGCTACACACGTGTTACAATGGGGCGCACAGAGGGAAGGGGCTGCGCAAGCAGCGTCGGATCGAGAAACCGCCCCTCAGTTCGGACTGGGGTCTGCAACCCGACCCCACGAAGCTGGATTCGCTAGTAATCGCGCATCAGCCATGGCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCAAGCCATGAAAGCCGGGGGCGCCTGAAGTCCGTGACCGCGAGGGTCGGCCTAGGGCGAAACCGGTGATTGGGGCTAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAACACCTCCTTT