Proteobacteria | Betaproteobacteria | Burkholderiales | Sutterellaceae |
Velikost genomu: 1 980 804 bp
Obsah GC% v obsahu: 46,60 %
Skenovací elektronová mikroskopie (zvětšení 20 000x)
TOP 15 enzymů exprimovaných během růstu v BHI mediu stanovené proteinovou hmotnostní spektrometrií
Enzyme | PSM counts | Pathway |
Formate acetyltransferase (EC=2.3.1.54) | 550 | Pyruvate metabolism |
Phosphoenolpyruvate synthase (EC=2.7.9.2) | 295 | Pyruvate metabolism |
Glutamate racemase (EC=5.1.1.3) | 544 | Protein and amino acid degradation |
Carboxypeptidase (EC=3.4.17.11) | 309 | Protein and amino acid degradation |
Peptidyl-lysine N-acetyltransferase (EC=2.3.1.-) | 293 | Protein and amino acid degradation |
Isoaspartyl dipeptidase (EC=3.4.19.-) | 232 | Protein and amino acid degradation |
Aspartate ammonia-lyase (EC=4.3.1.1) | 2230 | Protein and amino acid degradation |
Fumarate hydratase class I, anaerobic (EC=4.2.1.2) | 437 | Citric cycle |
Fumarate reductase iron-sulfur subunit (EC=1.3.5.1) | 250 | Anaerobic respiration |
Fumarate reductase (EC=1.3.5.4) | 1915 | Anaerobic respiration |
ATP synthase (EC=7.1.2.2) | 635 | ATP synthesis |
ATP synthase (EC=7.1.2.2) | 261 | ATP synthesis |
Phosphoribosylformylglycinamidine synthase (EC=6.3.5.3) | 242 | Purine metabolism |
p-aminobenzoyl-glutamate hydrolase (EC=3.5.1.-) | 222 | |
Periplasmic [Fe] hydrogenase (EC=1.12.7.2) | 270 |
MS raw data: ET73
kultivační médium: čokoládový agar
Sekvence 16S rRNA:
TGAACTTAAGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATGCAAGTCGAACGGCAGCATGGAGAGCTTGCTCTCTGATGGCGAGTGGCGAACGGGTGAGTAATACATCGGAACGTGTCCTGTTGTGGGGGATAACTACTCGAAAGAGTAGCTAATACCGCATAAGACCTAAGGGTGAAAGCGGGGGACCTTCGGGCCTCGCGCTATTGGAGCGGCCGATGACTGATTAGCTAGTTGGTGGGGTAAAGGCCTACCAAGGCGACGATCAGTAGCTGGTCTGAGAGGACGACCAGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGATCCAGCCATGCCGCGTGCGGGAAGAAGGCCTTCGGGTTGTAAACCGCTTTTGTTAGGAACGAAAAGGTATCTGTGAACAACAGGTATTGCTGACGGTACCTAAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGGGTAAGACAGGTGTGAAATCCCCGAGCTTAACTTGGGAACTGCACTTGTGACTGCTCAACTAGAGTATGTCAGAGGGAGGTGGAATTCCAAGTGTAGCAGTGAAATGCGTAGATATTTGGAAGAACACCGATGGCGAAGGCAGCCTCCTGGGATAATACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCAACTAGTTGTTGGGCCGCATGGCTTAGTAACACAGCTAACGCGAGAAGTTGACCGCCTGGGGAGTACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGATGATGTGGATTAATTCGATGCAACGCGAAAAACCTTACCTAGCCTTGACATGCCAGGAATCCTGATGAAAGTTGGGAGTGCCCGCAAGGGAATCTGGACACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCACTAGTTGCTACGCAAGAGCACTCTAGTGAAACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCCTCATGGCCCTTATGGCTAGGGCCTCACACGTCATACAATGGTCGGAACAGAGGGCAGCGAAGCTGTGAAGTGGAGCCAATCCCAGAAAACCGATCGTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCGGATCAGCACGCCGCGGTGAATACGTTCCCGGGTCTTGTACACACCGCCCGTCACACCATGGGAGTGGGGTTCACCAGAAGGCGTTTGCCTAACCTTCGGGAGGGCGGCGACCACGGTGGGTATCATGACTGGGGTGAAGTCGTAACAAGGTAGCAGTACCGGAAGGTGCGGCTGGATCACCTCCTTTCT