Proteobacteria | Betaproteobacteria | Burkholderiales | Sutterellaceae |
Velikost genomu: 2 951 411 bp
Obsah GC% v obsahu: 59,20 %
Skenovací elektronová mikroskopie (zvětšení 20 000x)
TOP 15 enzymů exprimovaných během růstu v BHI mediu stanovené proteinovou hmotnostní spektrometrií
Enzyme | PSM counts | Pathway |
Aspartate ammonia-lyase (EC=4.3.1.1) | 747 | Alanine, aspartate and glutamate metabolism |
Fumarate hydratase class I, anaerobic (EC=4.2.1.2) | 390 | Citrate cycle (TCA cycle) |
Fumarate reductase iron-sulfur subunit (EC=1.3.5.1) | 215 | Citrate cycle (TCA cycle) |
Fumarate reductase flavoprotein subunit (EC=1.3.5.4) | 1086 | |
Phosphoenolpyruvate synthase (EC=2.7.9.2) | 210 | Glycolysis / Gluconeogenesis |
Dissimilatory sulfite reductase SirA (EC=1.8.99.-) | 313 | |
Inducible ornithine decarboxylase (EC=4.1.1.17) | 153 | Arginine and proline metabolism |
Argininosuccinate lyase (EC=4.3.2.1) | 154 | Arginine biosynthesis |
Adenylosuccinate synthetase (EC=6.3.4.4) | 188 | Purine metabolism |
Urocanate reductase (EC=1.3.99.33) | 432 | Histidine metabolism |
Putative aldehyde dehydrogenase AldA (EC=1.2.1.3) | 154 | Glycolysis / Gluconeogenesis |
Hydrogenase-1 large chain (EC=1.12.99.6) | 184 | Nitrotoluene degradation |
Inosine-5′-monophosphate dehydrogenase (EC=1.1.1.205) | 190 | Purine metabolism |
Dipeptidase (EC=3.4.-.-) | 151 | |
Peptidyl-lysine N-acetyltransferase Pat (EC=2.3.1.-) | 145 |
MS raw data:An829
Sekvence 16S rRNA:
AAGAGTTTGATCCTGGCTCAGATTGAACGCTGGCGGCATGCTTTACACATGCAAGTCGAACGGCAGCATAGGGAGCTTGCTCCCTGATGGCGAGTGGCGCACGGGTGAGTAATACATCGGAACGTGTCCTTTTGTGGGGGATAACTGTCCGAAAGGACAGCTAATACCGCATAAGACCTGAGGGTGAAAGCAGGGGATCGCAAGACCTTGCGCGAGAGGAGCGGCCGATGGCCGATTAGCTGGTTGGGGAGGTAAAGGCTCACCAAGGCGACGATCGGTAGCTGGTCTGAGAGGACGACCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTGGACAATGGGGGCAACCCTGATCCAGCCATGCCGCGTGCGGGATGAAGGCCTTCGGGTTGTAAACCGCTTTTGTCAGGGACGAAAAGGGACGTGCCAATACCACGTTCTGCTGACGGTACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTTCGTAAGATAGATGTGAAATCCCCGGGCTCAACCTGGGAATTGCATTTATGACTGCGGGACTGGAGTTTGTCAGAGGGGGGTGGAATTCCAAGTGTAGCAGTGAAATGCGTAGATATTTGGAAGAACACCGATGGCGAAGGCAGCCCCCTGGGACATGACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCTACTGGTTGTTGGGGAAGCAATTCCTTGGTAACGAAGCCAACGCGTGAAGTAGACCGCCTGGGGAGTACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGATGATGTGGATTAATTCGATGCAACGCGAAAAACCTTACCTAGCCTTGACATGCCGAGAATCCTTAAGAGATTAGGGAGTGCCCGCAAGGGAATTCGGACACAGGTGCTGCATGGCTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCATTAGTTGCTACGAAAGGGCACTCTAATGAGACTGCCGGTGACAAACCGGAGGAAGGTGGGGATGACGTCAAGTCCTCATGGCCCTTATGGCTAGGGCCTCACACGTCATACAATGGTCGAAACAGAGGGAAGCGAAGCCGCGAGGTGAAGCAAATCCCAGAAAATCGATCGTAGTCCGGATTGCAGTCTGCAACTCGACTGCATGAAGTCGGAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATACGTTCCCGGGTCTTGTACACACCGCCCGTCACACCATGGGAGTGGGGTTCACCAGAAGACGTTTGCCCAACCGCAAGGAGGGCGGCGTCCACGGTGGGCTTCATGACTGGGGTGAAGTCGTAACAAGGTAGCAGTACCGGAAGGTGCGGCTGGATCACCTCCTTT