Bacteroides salanitronis An322

Bacteroidetes  Bacteroidia Bacteroidales Bacteroidaceae

Velikost genomu: 3 449 415 bp

Obsah GC% v genomu: 44,84 %

Skenovací elektronová mikroskopie (zvětšení 20 000x)

 

TOP 15 enzymů exprimovaných během růstu v BHI mediu stanovené proteinovou hmotnostní spektrometrií

Enzyme PSM counts Pathway
Fumarate hydratase class I, anaerobic (EC=4.2.1.2) 215 Citrate cycle (TCA cycle)
Malate dehydrogenase (EC=1.1.1.37) 205 Citrate cycle (TCA cycle)
Phosphoglucomutase (EC=5.4.2.2) 211 Glycolysis / Gluconeogenesis
Pyrophosphate–fructose 6-phosphate 1-phosphotransferase (EC=2.7.1.90) 261 Glycolysis / Gluconeogenesis
Glyceraldehyde-3-phosphate dehydrogenase A (EC=1.2.1.12) 1940 Glycolysis / Gluconeogenesis
Transketolase(EC=2.2.1.1) 241 Pentose phosphate pathway
Phosphoenolpyruvate carboxykinase (ATP) (EC=4.1.1.49) 2524 Pyruvate metabolism
Pyruvate, phosphate dikinase (EC=2.7.9.1) 208 Pyruvate metabolism
Pyruvate:ferredoxin oxidoreductase (EC=1.2.7.1) 325 Pyruvate metabolism
NADP-dependent malic enzyme (EC=1.1.1.40) 188 Pyruvate metabolism
Formate acetyltransferase (EC=2.3.1.54) 184 Pyruvate metabolism
Xylose isomerase (EC=5.3.1.5) 426 Starch and sucrose metabolism
Glycogen phosphorylase (EC=2.4.1.1) 241 Starch and sucrose metabolism
Fumarate reductase flavoprotein subunit (EC=1.3.5.4) 771
1,3-propanediol dehydrogenase (EC=1.1.1.202) 209

 

Sekvence 16S rRNA:

GATGGGTAGGGGTTCTGAGAGGAAGGCCCCCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGAGGAATATTGGTCAATGGCCGAGAGGCTGAACCAGCCAAGTAGCGTGGAGGATGACTGCCCTACGGGTTGTAAACTCCTTTTATAAGGGGGTAAAGGCGTCTACGTGTAGATGTTTGCAAGTACCTTATGAATAAGCATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGACGGGATGTCAAGTCAGCTGTGAAAGTCTGCGGCTTAACCGTAGAACTGCAGTTGAAACTGGCGTTCTTGAGTGCGTTCGAGGCAGGCGGAATTCGTGGTGTAGCGGTGAAATGCATAGATATCACGAAGAACCCCGATTGCGAAGGCAGCCTGCCAGGCCGCTACTGACGTTGAAGCTCGAAAGTGCGGGTATCAAACAGGATTAGATACCCTGGTAGTCCGCACGGTAAACGATGGGCACTCGCTGTCGGCGACATACGGCCGGCGGCTTAGCGAAAGCGTTAAGTGCCCCACCTGGGGAGTACGCCGGCAACGGTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGAGGAACATGTGGTTTAATTCGATGATACGCGAGGAACCTTACCCGGGCTTGAACTGTGCCTGAATCCAGAGGAAACTCCGGAGCCAGCAATGGCAGGCATGGAGGTGCTGCATGGTTGTCGTCAGCTCGTGCCGTGAGGTGTCGGCTTAAGTGCCATAACGAGCGCAACCCCTTCGGCCAGTTGCCATCAGGTGGTGCTGGGGACTCTGGCCGTACTGCCATCGTAAGATGCGAGGAAGGTGGGGATGACGTCAAATCAGCACGGCCCTTACGTCCGGGGCTACACACGTGTTACAATGGGGGGTACAGAGGGCCGCCATCCGGCGACGGAGCGCCAATCCCGAAAGCCTCCCCCAGTTCGGACTGGAGTCTGCAACCCGACTCCACGAAGCTGGATTCGCTAGTAATCGCGCATCAGCCACGGCGCGGTGAATACGTTCCCGGGCCTTGTACACACCGCCCGTCAAGCCATGAAAGCCGGGGGTACCTGAAGTGCGTAACCGTAAGGGGCGCCCTAGGGTAAAACCGGTGATTGGGGCTAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAACACCTCCTTT